58 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_19245	Cysteine protease. (492 aa)
	JCGZ_14564	Autophagy-related protein. (122 aa)
	JCGZ_22481	Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes. (167 aa)
	JCGZ_17603	WD_REPEATS_REGION domain-containing protein. (804 aa)
	JCGZ_17708	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (864 aa)
	JCGZ_22215	ATG13 domain-containing protein. (656 aa)
	JCGZ_12363	WD_REPEATS_REGION domain-containing protein. (1623 aa)
	JCGZ_14026	Uncharacterized protein. (774 aa)
	JCGZ_14091	Autophagy-related protein. (125 aa)
	JCGZ_14266	Uncharacterized protein. (512 aa)
	JCGZ_14311	BAG domain-containing protein. (1221 aa)
	JCGZ_11406	Uncharacterized protein. (755 aa)
	JCGZ_11436	Uncharacterized protein; Belongs to the AAA ATPase family. (813 aa)
	JCGZ_13737	Uncharacterized protein. (428 aa)
	JCGZ_11375	WD_REPEATS_REGION domain-containing protein. (509 aa)
	JCGZ_12331	Uncharacterized protein. (217 aa)
	JCGZ_08746	Uncharacterized protein. (1283 aa)
	JCGZ_09437	Spatacsin_C domain-containing protein. (2289 aa)
	JCGZ_08582	CNH domain-containing protein. (1018 aa)
	JCGZ_10510	Autophagy protein 5; Required for autophagy. (353 aa)
	JCGZ_07356	Uncharacterized protein. (1547 aa)
	JCGZ_04094	Uncharacterized protein. (238 aa)
	JCGZ_04075	ATG11 domain-containing protein. (1159 aa)
	JCGZ_00803	BCAS3 domain-containing protein. (921 aa)
	JCGZ_04091	Uncharacterized protein. (333 aa)
	JCGZ_08384	Uncharacterized protein. (98 aa)
	JCGZ_01105	Uncharacterized protein. (254 aa)
	JCGZ_24706	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family. (71 aa)
	JCGZ_01630	Uncharacterized protein. (2003 aa)
	JCGZ_05311	CNH domain-containing protein. (1001 aa)
	JCGZ_00901	Autophagy-related protein. (123 aa)
	JCGZ_00971	CDC48_N domain-containing protein. (138 aa)
	JCGZ_16546	Uncharacterized protein; Belongs to the AAA ATPase family. (805 aa)
	JCGZ_14383	Uncharacterized protein. (309 aa)
	JCGZ_14172	Protein kinase domain-containing protein. (654 aa)
	JCGZ_13893	Uncharacterized protein. (434 aa)
	JCGZ_19036	Uncharacterized protein. (112 aa)
	JCGZ_17761	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (809 aa)
	JCGZ_23323	Uncharacterized protein. (400 aa)
	JCGZ_22219	Protein kinase domain-containing protein. (289 aa)
	JCGZ_03290	Uncharacterized protein. (406 aa)
	JCGZ_21211	Autophagy-related protein. (122 aa)
	JCGZ_23401	BCAS3 domain-containing protein. (982 aa)
	JCGZ_03385	Autophagy-related protein. (122 aa)
	JCGZ_03405	Protein transport protein sec16. (1408 aa)
	JCGZ_03764	Uncharacterized protein. (248 aa)
	JCGZ_24126	Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes. (166 aa)
	JCGZ_05405	Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic. (951 aa)
	JCGZ_00212	Uncharacterized protein. (198 aa)
	JCGZ_15073	Autophagy_act_C domain-containing protein. (227 aa)
	JCGZ_05462	Uncharacterized protein. (805 aa)
	JCGZ_21146	Uncharacterized protein. (256 aa)
	JCGZ_25110	Protein kinase domain-containing protein. (720 aa)
	JCGZ_00543	ATG13 domain-containing protein. (623 aa)
	JCGZ_21999	BCAS3 domain-containing protein. (1012 aa)
	JCGZ_26278	Autophagy-related protein 3. (314 aa)
	JCGZ_21169	Uncharacterized protein. (303 aa)
	JCGZ_21553	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (699 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00212	JCGZ_01630	A0A067LD40	A0A067L1H4	Uncharacterized protein.	Uncharacterized protein.	0.414
JCGZ_00543	JCGZ_01630	A0A067JGQ4	A0A067L1H4	ATG13 domain-containing protein.	Uncharacterized protein.	0.659
JCGZ_00543	JCGZ_04075	A0A067JGQ4	A0A067KRK5	ATG13 domain-containing protein.	ATG11 domain-containing protein.	0.937
JCGZ_00543	JCGZ_04091	A0A067JGQ4	A0A067KUX4	ATG13 domain-containing protein.	Uncharacterized protein.	0.457
JCGZ_00543	JCGZ_04094	A0A067JGQ4	A0A067KRD0	ATG13 domain-containing protein.	Uncharacterized protein.	0.457
JCGZ_00543	JCGZ_07356	A0A067JGQ4	A0A067KND5	ATG13 domain-containing protein.	Uncharacterized protein.	0.695
JCGZ_00543	JCGZ_10510	A0A067JGQ4	A0A067KL97	ATG13 domain-containing protein.	Autophagy protein 5; Required for autophagy.	0.569
JCGZ_00543	JCGZ_11375	A0A067JGQ4	A0A067KGM4	ATG13 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.491
JCGZ_00543	JCGZ_11406	A0A067JGQ4	A0A067KFI8	ATG13 domain-containing protein.	Uncharacterized protein.	0.682
JCGZ_00543	JCGZ_12331	A0A067JGQ4	A0A067KHY0	ATG13 domain-containing protein.	Uncharacterized protein.	0.997
JCGZ_00543	JCGZ_14172	A0A067JGQ4	A0A067JWQ1	ATG13 domain-containing protein.	Protein kinase domain-containing protein.	0.922
JCGZ_00543	JCGZ_14266	A0A067JGQ4	A0A067K881	ATG13 domain-containing protein.	Uncharacterized protein.	0.725
JCGZ_00543	JCGZ_17708	A0A067JGQ4	A0A067K2R5	ATG13 domain-containing protein.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.657
JCGZ_00543	JCGZ_17761	A0A067JGQ4	A0A067JUT7	ATG13 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.695
JCGZ_00543	JCGZ_19245	A0A067JGQ4	A0A067K070	ATG13 domain-containing protein.	Cysteine protease.	0.637
JCGZ_00543	JCGZ_21553	A0A067JGQ4	A0A067JBD6	ATG13 domain-containing protein.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.629
JCGZ_00543	JCGZ_22215	A0A067JGQ4	A0A067K2U5	ATG13 domain-containing protein.	ATG13 domain-containing protein.	0.905
JCGZ_00543	JCGZ_22219	A0A067JGQ4	A0A067JTG8	ATG13 domain-containing protein.	Protein kinase domain-containing protein.	0.951
JCGZ_00543	JCGZ_24706	A0A067JGQ4	A0A067KX65	ATG13 domain-containing protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	0.487
JCGZ_00543	JCGZ_25110	A0A067JGQ4	A0A067JKN6	ATG13 domain-containing protein.	Protein kinase domain-containing protein.	0.991