29 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_07447	WD_REPEATS_REGION domain-containing protein. (328 aa)
	JCGZ_16173	Uncharacterized protein. (1790 aa)
	JCGZ_08747	Spt4 domain-containing protein. (158 aa)
	JCGZ_07475	TPR_REGION domain-containing protein. (1066 aa)
	JCGZ_04473	Uncharacterized protein; Belongs to the cyclin family. (424 aa)
	JCGZ_24615	Uncharacterized protein. (1051 aa)
	JCGZ_09726	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (450 aa)
	JCGZ_01277	Uncharacterized protein. (362 aa)
	JCGZ_24859	Uncharacterized protein. (515 aa)
	JCGZ_06535	Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. (104 aa)
	JCGZ_04673	EAF domain-containing protein. (322 aa)
	JCGZ_22634	Uncharacterized protein; Belongs to the cyclin family. (595 aa)
	JCGZ_19651	Uncharacterized protein. (1700 aa)
	JCGZ_22535	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
	JCGZ_22538	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
	JCGZ_23181	Uncharacterized protein. (1076 aa)
	JCGZ_02508	EAF domain-containing protein. (339 aa)
	JCGZ_21409	Plus3 domain-containing protein. (658 aa)
	JCGZ_21498	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (88 aa)
	JCGZ_02197	CDC73_C domain-containing protein. (127 aa)
	JCGZ_06480	Uncharacterized protein. (1600 aa)
	JCGZ_02147	Uncharacterized protein; Belongs to the cyclin family. (378 aa)
	JCGZ_03941	Uncharacterized protein. (226 aa)
	JCGZ_02923	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (124 aa)
	JCGZ_25243	Transcription elongation factor SPT5. (1046 aa)
	JCGZ_11708	Uncharacterized protein. (631 aa)
	JCGZ_13146	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (641 aa)
	JCGZ_19328	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1612 aa)
	JCGZ_23918	Uncharacterized protein. (410 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_02147	JCGZ_02508	A0A067L7U1	A0A067JFJ1	Uncharacterized protein; Belongs to the cyclin family.	EAF domain-containing protein.	0.496
JCGZ_02147	JCGZ_03941	A0A067L7U1	A0A067L5N6	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein.	0.695
JCGZ_02147	JCGZ_04673	A0A067L7U1	A0A067L0K4	Uncharacterized protein; Belongs to the cyclin family.	EAF domain-containing protein.	0.496
JCGZ_02147	JCGZ_06535	A0A067L7U1	A0A067LEF4	Uncharacterized protein; Belongs to the cyclin family.	Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.	0.694
JCGZ_02147	JCGZ_08747	A0A067L7U1	A0A067KM71	Uncharacterized protein; Belongs to the cyclin family.	Spt4 domain-containing protein.	0.694
JCGZ_02147	JCGZ_09726	A0A067L7U1	A0A067LAP1	Uncharacterized protein; Belongs to the cyclin family.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.570
JCGZ_02147	JCGZ_11708	A0A067L7U1	A0A067K5D8	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein.	0.436
JCGZ_02147	JCGZ_13146	A0A067L7U1	A0A067K8N4	Uncharacterized protein; Belongs to the cyclin family.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.570
JCGZ_02147	JCGZ_16173	A0A067L7U1	A0A067KF58	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein.	0.621
JCGZ_02147	JCGZ_23181	A0A067L7U1	A0A067JKL1	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein.	0.565
JCGZ_02147	JCGZ_24615	A0A067L7U1	A0A067KWM6	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein.	0.565
JCGZ_02147	JCGZ_25243	A0A067L7U1	A0A067L3Q2	Uncharacterized protein; Belongs to the cyclin family.	Transcription elongation factor SPT5.	0.621
JCGZ_02197	JCGZ_02923	A0A067L814	A0A067L4Q8	CDC73_C domain-containing protein.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.700
JCGZ_02197	JCGZ_03941	A0A067L814	A0A067L5N6	CDC73_C domain-containing protein.	Uncharacterized protein.	0.817
JCGZ_02197	JCGZ_06535	A0A067L814	A0A067LEF4	CDC73_C domain-containing protein.	Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.	0.847
JCGZ_02197	JCGZ_07447	A0A067L814	A0A067KCD2	CDC73_C domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.566
JCGZ_02197	JCGZ_07475	A0A067L814	A0A067KQ03	CDC73_C domain-containing protein.	TPR_REGION domain-containing protein.	0.988
JCGZ_02197	JCGZ_08747	A0A067L814	A0A067KM71	CDC73_C domain-containing protein.	Spt4 domain-containing protein.	0.847
JCGZ_02197	JCGZ_09726	A0A067L814	A0A067LAP1	CDC73_C domain-containing protein.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.934
JCGZ_02197	JCGZ_11708	A0A067L814	A0A067K5D8	CDC73_C domain-containing protein.	Uncharacterized protein.	0.992