48 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_06124	Protein kinase domain-containing protein. (621 aa)
	JHL07K02.6	JHL07K02.6 protein. (265 aa)
	JCGZ_01539	Uncharacterized protein. (194 aa)
	JCGZ_01224	POTRA domain-containing protein. (523 aa)
	JCGZ_10785	ANK_REP_REGION domain-containing protein. (350 aa)
	JCGZ_10048	Uncharacterized protein. (320 aa)
	JCGZ_23897	TPR_REGION domain-containing protein. (595 aa)
	JCGZ_02949	Bac_surface_Ag domain-containing protein. (814 aa)
	JCGZ_17393	Uncharacterized protein. (381 aa)
	JCGZ_24698	RING-type domain-containing protein. (391 aa)
	JCGZ_23021	Translocase of chloroplast; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis. (297 aa)
	JCGZ_23905	Bac_surface_Ag domain-containing protein. (360 aa)
	JCGZ_04852	Uncharacterized protein. (356 aa)
	JCGZ_04410	Uncharacterized protein. (212 aa)
	JCGZ_04853	Uncharacterized protein. (113 aa)
	JCGZ_15733	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (134 aa)
	JCGZ_08050	Uncharacterized protein. (167 aa)
	JCGZ_24836	Uncharacterized protein. (618 aa)
	JCGZ_08759	Glycos_transf_1 domain-containing protein. (789 aa)
	EKO	Uncharacterized protein; Belongs to the cytochrome P450 family. (500 aa)
	JCGZ_05043	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (954 aa)
	JCGZ_07151	Protein kinase domain-containing protein. (628 aa)
	JCGZ_11047	Uncharacterized protein. (146 aa)
	JCGZ_17012	AIG1-type G domain-containing protein. (787 aa)
	JCGZ_18275	Uncharacterized protein. (990 aa)
	JCGZ_19268	Uncharacterized protein. (347 aa)
	JCGZ_14441	Glycos_transf_1 domain-containing protein. (464 aa)
	JCGZ_13910	AIG1-type G domain-containing protein. (1406 aa)
	JCGZ_19044	Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family. (635 aa)
	JCGZ_14151	Translocase of chloroplast; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis. (297 aa)
	JCGZ_13226	Uncharacterized protein; Belongs to the MlaE permease family. (325 aa)
	JCGZ_15196	Uncharacterized protein. (184 aa)
	JCGZ_25515	Uncharacterized protein. (159 aa)
	JCGZ_13937	Uncharacterized protein. (131 aa)
	JCGZ_18976	Uncharacterized protein. (178 aa)
	JCGZ_18877	AIG1-type G domain-containing protein. (1386 aa)
	JCGZ_26010	Uncharacterized protein. (268 aa)
	JCGZ_21935	G domain-containing protein. (920 aa)
	JCGZ_24150	Uncharacterized protein. (520 aa)
	JCGZ_21710	Uncharacterized protein. (213 aa)
	JCGZ_21400	Uncharacterized protein. (132 aa)
	JCGZ_25815	Uncharacterized protein. (657 aa)
	JCGZ_25858	Uncharacterized protein. (297 aa)
	JCGZ_27097	TPR_REGION domain-containing protein. (590 aa)
	JCGZ_25904	POTRA domain-containing protein. (720 aa)
	JCGZ_21978	RING-type domain-containing protein. (344 aa)
	JCGZ_06371	AIG1-type G domain-containing protein. (1204 aa)
	JCGZ_05845	Uncharacterized protein. (168 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_02949	JCGZ_06371	A0A067LDU8	A0A067J9I4	Bac_surface_Ag domain-containing protein.	AIG1-type G domain-containing protein.	0.883
JCGZ_02949	JCGZ_13910	A0A067LDU8	A0A067K8L0	Bac_surface_Ag domain-containing protein.	AIG1-type G domain-containing protein.	0.900
JCGZ_02949	JCGZ_14151	A0A067LDU8	A0A067K7Y2	Bac_surface_Ag domain-containing protein.	Translocase of chloroplast; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis.	0.884
JCGZ_02949	JCGZ_17012	A0A067LDU8	A0A067KDC9	Bac_surface_Ag domain-containing protein.	AIG1-type G domain-containing protein.	0.614
JCGZ_02949	JCGZ_18877	A0A067LDU8	A0A067JV91	Bac_surface_Ag domain-containing protein.	AIG1-type G domain-containing protein.	0.903
JCGZ_02949	JCGZ_23021	A0A067LDU8	A0A067L9C1	Bac_surface_Ag domain-containing protein.	Translocase of chloroplast; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis.	0.884
JCGZ_04410	JCGZ_21710	A0A067L1X1	A0A067JP07	Uncharacterized protein.	Uncharacterized protein.	0.553
JCGZ_04852	JCGZ_05043	A0A067L2C3	A0A067KRP4	Uncharacterized protein.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.504
JCGZ_04852	JCGZ_10048	A0A067L2C3	A0A067LG18	Uncharacterized protein.	Uncharacterized protein.	0.478
JCGZ_04852	JCGZ_26010	A0A067L2C3	A0A067JRN3	Uncharacterized protein.	Uncharacterized protein.	0.479
JCGZ_04853	JCGZ_05043	A0A067L174	A0A067KRP4	Uncharacterized protein.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.504
JCGZ_04853	JCGZ_10048	A0A067L174	A0A067LG18	Uncharacterized protein.	Uncharacterized protein.	0.478
JCGZ_04853	JCGZ_26010	A0A067L174	A0A067JRN3	Uncharacterized protein.	Uncharacterized protein.	0.479
JCGZ_05043	JCGZ_04852	A0A067KRP4	A0A067L2C3	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.504
JCGZ_05043	JCGZ_04853	A0A067KRP4	A0A067L174	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.504
JCGZ_05043	JCGZ_10048	A0A067KRP4	A0A067LG18	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.599
JCGZ_05043	JCGZ_21935	A0A067KRP4	A0A067JPJ4	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	G domain-containing protein.	0.580
JCGZ_05043	JCGZ_26010	A0A067KRP4	A0A067JRN3	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.599
JCGZ_05043	JHL07K02.6	A0A067KRP4	E6NU06	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	JHL07K02.6 protein.	0.437
JCGZ_05845	JCGZ_10048	A0A067J8I7	A0A067LG18	Uncharacterized protein.	Uncharacterized protein.	0.569