Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AP2 | JCGZ_07222 | R9QAL1 | A0A067KBP9 | AP2/ERF transcription factor. | HTH cro/C1-type domain-containing protein. | 0.533 |
| AP2 | JCGZ_17512 | R9QAL1 | A0A067K3H4 | AP2/ERF transcription factor. | AP2/ERF domain-containing protein. | 0.631 |
| AP2 | WRI1-2 | R9QAL1 | A0A067LAB4 | AP2/ERF transcription factor. | Uncharacterized protein. | 0.752 |
| AP2-EREBP1 | AP2-EREBP2 | A0A067K7Q3 | A0A067KD77 | AP2/ERF domain-containing protein. | Uncharacterized protein. | 0.414 |
| AP2-EREBP2 | AP2-EREBP1 | A0A067KD77 | A0A067K7Q3 | Uncharacterized protein. | AP2/ERF domain-containing protein. | 0.414 |
| ARF19 | JCGZ_01025 | A0A067KQ43 | A0A067KWD8 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Deacetylase sirtuin-type domain-containing protein. | 0.607 |
| ARF19 | JCGZ_03452 | A0A067KQ43 | A0A067KUN2 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | AP2/ERF domain-containing protein. | 0.455 |
| ARF19 | JCGZ_08249 | A0A067KQ43 | A0A067KPK2 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.409 |
| ARF19 | JCGZ_19292 | A0A067KQ43 | A0A067K333 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily. | 0.607 |
| EBF1 | ERF1 | A0A067K8I2 | I6MBV0 | EIN3-binding protein. | Ethylene-responsive transcription factor. | 0.668 |
| EBF1 | JCGZ_02291 | A0A067K8I2 | A0A067KZB8 | EIN3-binding protein. | Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway. | 0.544 |
| EBF1 | JCGZ_07165 | A0A067K8I2 | A0A067KP65 | EIN3-binding protein. | F-box domain-containing protein. | 0.901 |
| EBF1 | JCGZ_07222 | A0A067K8I2 | A0A067KBP9 | EIN3-binding protein. | HTH cro/C1-type domain-containing protein. | 0.459 |
| EBF1 | JCGZ_07917 | A0A067K8I2 | A0A067J8V1 | EIN3-binding protein. | Uncharacterized protein. | 0.909 |
| EBF1 | JCGZ_16519 | A0A067K8I2 | A0A067KA15 | EIN3-binding protein. | Uncharacterized protein. | 0.716 |
| EBF1 | JCGZ_23838 | A0A067K8I2 | A0A067L359 | EIN3-binding protein. | Uncharacterized protein. | 0.933 |
| ERF1 | EBF1 | I6MBV0 | A0A067K8I2 | Ethylene-responsive transcription factor. | EIN3-binding protein. | 0.668 |
| JCGZ_00437 | JCGZ_23837 | A0A067JS70 | A0A067LEF6 | Uncharacterized protein. | Uncharacterized protein. | 0.445 |
| JCGZ_01025 | ARF19 | A0A067KWD8 | A0A067KQ43 | Deacetylase sirtuin-type domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.607 |
| JCGZ_01025 | JCGZ_19292 | A0A067KWD8 | A0A067K333 | Deacetylase sirtuin-type domain-containing protein. | NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily. | 0.962 |
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