100 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_26381	Uncharacterized protein. (933 aa)
	JCGZ_20464	Uncharacterized protein. (193 aa)
	JCGZ_26276	Uncharacterized protein. (800 aa)
	JCGZ_22548	C2H2-type domain-containing protein. (264 aa)
	JCGZ_20723	Uncharacterized protein. (560 aa)
	JCGZ_21966	Uncharacterized protein. (312 aa)
	JCGZ_21415	Uncharacterized protein. (1249 aa)
	JCGZ_25745	Nuclear cap-binding protein subunit 2. (252 aa)
	JCGZ_21146	Uncharacterized protein. (256 aa)
	JCGZ_27087	C2 domain-containing protein. (184 aa)
	JCGZ_23449	Protein kinase domain-containing protein. (976 aa)
	JCGZ_26193	Glyco_transf_64 domain-containing protein. (346 aa)
	JCGZ_26113	Uncharacterized protein. (542 aa)
	JCGZ_26028	Uncharacterized protein. (219 aa)
	JCGZ_03045	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (246 aa)
	JCGZ_21578	DOG1 domain-containing protein. (250 aa)
	JCGZ_21412	Uncharacterized protein. (970 aa)
	MFT2	Mother of FT and TFL1 2. (175 aa)
	JCGZ_25995	Uncharacterized protein. (193 aa)
	JCGZ_17730	Uncharacterized protein. (969 aa)
	JCGZ_17829	RING-type domain-containing protein. (466 aa)
	JCGZ_00422	Uncharacterized protein. (208 aa)
	JCGZ_23248	Uncharacterized protein. (571 aa)
	JCGZ_22449	Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family. (519 aa)
	JCGZ_20017	Bet_v_1 domain-containing protein. (124 aa)
	JCGZ_23498	Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1825 aa)
	JCGZ_25358	HTH La-type RNA-binding domain-containing protein. (477 aa)
	JCGZ_01315	Glyco_transf_64 domain-containing protein. (330 aa)
	JCGZ_01199	Uncharacterized protein. (217 aa)
	JCGZ_17471	IPPc domain-containing protein. (645 aa)
	JCGZ_06661	DUF155 domain-containing protein. (404 aa)
	JCGZ_10065	Uncharacterized protein. (176 aa)
	JCGZ_10230	RING-type domain-containing protein. (464 aa)
	JHL20J20.9	JHL20J20.9 protein. (601 aa)
	JCGZ_25965	MIF4G domain-containing protein. (868 aa)
	JCGZ_24489	Uncharacterized protein. (539 aa)
	JCGZ_24549	Uncharacterized protein. (1617 aa)
	JCGZ_01277	Uncharacterized protein. (362 aa)
	JCGZ_15722	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (336 aa)
	JCGZ_15862	Uncharacterized protein. (764 aa)
	JCGZ_01498	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. (1324 aa)
	MFT1	MOTHER of FT and TFL1 1. (172 aa)
	JCGZ_19096	G_PROTEIN_RECEP_F2_4 domain-containing protein. (300 aa)
	JCGZ_18948	Bet_v_1 domain-containing protein; Belongs to the BetVI family. (157 aa)
	JCGZ_14274	Uncharacterized protein. (189 aa)
	JCGZ_18642	Uncharacterized protein. (217 aa)
	JCGZ_19297	Prenylcys_lyase domain-containing protein. (496 aa)
	JCGZ_17582	TF-B3 domain-containing protein. (577 aa)
	JCGZ_11383	RING-type domain-containing protein. (429 aa)
	JCGZ_11647	Uncharacterized protein. (200 aa)
	JCGZ_14729	TPR_REGION domain-containing protein. (688 aa)
	JCGZ_15213	BZIP domain-containing protein. (369 aa)
	JCGZ_12344	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (362 aa)
	JCGZ_07422	Uncharacterized protein. (370 aa)
	JCGZ_07637	PPM-type phosphatase domain-containing protein. (546 aa)
	JCGZ_12754	C2H2-type domain-containing protein. (241 aa)
	JCGZ_17137	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (338 aa)
	JCGZ_09309	Uncharacterized protein. (834 aa)
	JCGZ_09295	RING-type domain-containing protein. (168 aa)
	JCGZ_07569	RING-type domain-containing protein. (312 aa)
	JCGZ_13777	Uncharacterized protein. (265 aa)
	JCGZ_08985	RING-type domain-containing protein. (429 aa)
	JCGZ_09816	Bet_v_1 domain-containing protein. (165 aa)
	JCGZ_09812	Bet_v_1 domain-containing protein. (164 aa)
	JCGZ_08043	C2 NT-type domain-containing protein. (855 aa)
	JCGZ_08297	Uncharacterized protein. (335 aa)
	JCGZ_07186	Homeobox domain-containing protein. (365 aa)
	JCGZ_07441	PPM-type phosphatase domain-containing protein. (546 aa)
	JCGZ_04720	C2 domain-containing protein. (171 aa)
	JCGZ_04885	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (362 aa)
	JCGZ_07680	Uncharacterized protein. (191 aa)
	JCGZ_12672	Uncharacterized protein. (201 aa)
	JCGZ_09212	Protein kinase domain-containing protein. (1061 aa)
	LEC1-1	CBFD_NFYB_HMF domain-containing protein. (263 aa)
	JCGZ_04806	C2H2-type domain-containing protein. (250 aa)
	LEC1-2	Leafy-cotyledon protein 1. (226 aa)
	JCGZ_08952	C2 domain-containing protein. (167 aa)
	JCGZ_01105	Uncharacterized protein. (254 aa)
	JCGZ_09809	Bet_v_1 domain-containing protein. (165 aa)
	JCGZ_09814	Bet_v_1 domain-containing protein. (167 aa)
	JCGZ_24731	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5560 aa)
	JCGZ_24736	PPM-type phosphatase domain-containing protein. (539 aa)
	JCGZ_24855	Uncharacterized protein. (635 aa)
	JCGZ_08296	Uncharacterized protein. (55 aa)
	JCGZ_01595	BZIP domain-containing protein. (456 aa)
	JCGZ_02967	Uncharacterized protein. (337 aa)
	JCGZ_04255	BZIP domain-containing protein. (413 aa)
	JCGZ_00209	Uncharacterized protein. (373 aa)
	JCGZ_15680	Uncharacterized protein. (144 aa)
	JCGZ_02801	Uncharacterized protein. (185 aa)
	JCGZ_23678	BZIP domain-containing protein. (419 aa)
	JCGZ_05699	Uncharacterized protein. (435 aa)
	JCGZ_02802	Bet_v_1 domain-containing protein. (167 aa)
	JCGZ_06555	Uncharacterized protein. (309 aa)
	JCGZ_06565	Uncharacterized protein. (625 aa)
	JCGZ_23806	Uncharacterized protein. (518 aa)
	JCGZ_25470	ABC transporter domain-containing protein. (668 aa)
	JCGZ_10073	Uncharacterized protein. (143 aa)
	JCGZ_06516	Uncharacterized protein. (445 aa)
	JCGZ_22421	Uncharacterized protein. (246 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00209	JCGZ_18642	A0A067L1W2	A0A067K0T3	Uncharacterized protein.	Uncharacterized protein.	0.478
JCGZ_00422	JCGZ_07441	A0A067JS58	A0A067KNK7	Uncharacterized protein.	PPM-type phosphatase domain-containing protein.	0.774
JCGZ_00422	JCGZ_07637	A0A067JS58	A0A067KCW5	Uncharacterized protein.	PPM-type phosphatase domain-containing protein.	0.774
JCGZ_00422	JCGZ_24736	A0A067JS58	A0A067KX96	Uncharacterized protein.	PPM-type phosphatase domain-containing protein.	0.774
JCGZ_01105	JCGZ_21146	A0A067KWJ7	A0A067JKZ9	Uncharacterized protein.	Uncharacterized protein.	0.901
JCGZ_01199	JCGZ_07441	A0A067LK80	A0A067KNK7	Uncharacterized protein.	PPM-type phosphatase domain-containing protein.	0.774
JCGZ_01199	JCGZ_07637	A0A067LK80	A0A067KCW5	Uncharacterized protein.	PPM-type phosphatase domain-containing protein.	0.774
JCGZ_01199	JCGZ_24736	A0A067LK80	A0A067KX96	Uncharacterized protein.	PPM-type phosphatase domain-containing protein.	0.774
JCGZ_01277	JCGZ_01498	A0A067L8R3	A0A067LCL7	Uncharacterized protein.	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	0.984
JCGZ_01277	JCGZ_09309	A0A067L8R3	A0A067KFK8	Uncharacterized protein.	Uncharacterized protein.	0.968
JCGZ_01498	JCGZ_01277	A0A067LCL7	A0A067L8R3	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	Uncharacterized protein.	0.984
JCGZ_01498	JCGZ_09309	A0A067LCL7	A0A067KFK8	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	Uncharacterized protein.	0.975
JCGZ_01595	JCGZ_04885	A0A067L1E3	A0A067KQ66	BZIP domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.725
JCGZ_01595	JCGZ_12344	A0A067L1E3	A0A067KA71	BZIP domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.725
JCGZ_01595	JCGZ_17137	A0A067L1E3	A0A067KF14	BZIP domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.685
JCGZ_04255	JCGZ_04885	A0A067L1G8	A0A067KQ66	BZIP domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.725
JCGZ_04255	JCGZ_12344	A0A067L1G8	A0A067KA71	BZIP domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.725
JCGZ_04255	JCGZ_17137	A0A067L1G8	A0A067KF14	BZIP domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.685
JCGZ_04885	JCGZ_01595	A0A067KQ66	A0A067L1E3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	BZIP domain-containing protein.	0.725
JCGZ_04885	JCGZ_04255	A0A067KQ66	A0A067L1G8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	BZIP domain-containing protein.	0.725