18 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_06687	Uncharacterized protein. (398 aa)
	JCGZ_01137	Uncharacterized protein. (781 aa)
	JCGZ_10679	Ribosomal_L18_c domain-containing protein. (298 aa)
	JCGZ_06681	Uncharacterized protein. (640 aa)
	JCGZ_09334	Uncharacterized protein. (110 aa)
	JCGZ_09080	MYB family protein. (357 aa)
	JCGZ_13223	Uncharacterized protein. (935 aa)
	JCGZ_14555	Uncharacterized protein. (212 aa)
	JCGZ_14754	Uncharacterized protein. (351 aa)
	JCGZ_13417	LOB domain-containing protein. (218 aa)
	JCGZ_17772	Uncharacterized protein. (215 aa)
	JCGZ_17553	Uncharacterized protein. (776 aa)
	JCGZ_15054	Ribosomal_L18_c domain-containing protein. (299 aa)
	JCGZ_06684	Uncharacterized protein. (540 aa)
	JCGZ_23434	Uncharacterized protein. (922 aa)
	JCGZ_06683	Uncharacterized protein. (207 aa)
	JCGZ_23508	WD_REPEATS_REGION domain-containing protein. (299 aa)
	JCGZ_20784	Uncharacterized protein. (213 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_09080	JCGZ_13417	A0A067KHN5	A0A067K8Q0	MYB family protein.	LOB domain-containing protein.	0.842
JCGZ_09080	JCGZ_14555	A0A067KHN5	A0A067KAF2	MYB family protein.	Uncharacterized protein.	0.449
JCGZ_09080	JCGZ_20784	A0A067KHN5	A0A067JS14	MYB family protein.	Uncharacterized protein.	0.449
JCGZ_10679	JCGZ_15054	A0A067KS93	A0A067LLF7	Ribosomal_L18_c domain-containing protein.	Ribosomal_L18_c domain-containing protein.	0.900
JCGZ_13417	JCGZ_09080	A0A067K8Q0	A0A067KHN5	LOB domain-containing protein.	MYB family protein.	0.842
JCGZ_13417	JCGZ_14555	A0A067K8Q0	A0A067KAF2	LOB domain-containing protein.	Uncharacterized protein.	0.437
JCGZ_13417	JCGZ_20784	A0A067K8Q0	A0A067JS14	LOB domain-containing protein.	Uncharacterized protein.	0.437
JCGZ_14555	JCGZ_09080	A0A067KAF2	A0A067KHN5	Uncharacterized protein.	MYB family protein.	0.449
JCGZ_14555	JCGZ_13417	A0A067KAF2	A0A067K8Q0	Uncharacterized protein.	LOB domain-containing protein.	0.437
JCGZ_15054	JCGZ_10679	A0A067LLF7	A0A067KS93	Ribosomal_L18_c domain-containing protein.	Ribosomal_L18_c domain-containing protein.	0.900
JCGZ_20784	JCGZ_09080	A0A067JS14	A0A067KHN5	Uncharacterized protein.	MYB family protein.	0.449
JCGZ_20784	JCGZ_13417	A0A067JS14	A0A067K8Q0	Uncharacterized protein.	LOB domain-containing protein.	0.437