42 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_05799	WD_REPEATS_REGION domain-containing protein. (898 aa)
	JCGZ_10235	SGF29 C-terminal domain-containing protein. (269 aa)
	JCGZ_17400	N-acetyltransferase domain-containing protein. (1243 aa)
	JCGZ_06510	Uncharacterized protein. (282 aa)
	JCGZ_16081	MRG domain-containing protein. (317 aa)
	JCGZ_24953	Uncharacterized protein. (1909 aa)
	JCGZ_23764	zf-C3Hc3H domain-containing protein. (305 aa)
	JCGZ_15700	Uncharacterized protein. (167 aa)
	JCGZ_24772	WD_REPEATS_REGION domain-containing protein. (466 aa)
	JCGZ_16029	Uncharacterized protein. (747 aa)
	JCGZ_15939	RuvB-like helicase; Belongs to the RuvB family. (458 aa)
	JCGZ_02543	N-acetyltransferase domain-containing protein. (252 aa)
	JCGZ_24695	Uncharacterized protein. (175 aa)
	JCGZ_01025	Deacetylase sirtuin-type domain-containing protein. (465 aa)
	JCGZ_02329	Uncharacterized protein. (160 aa)
	JCGZ_12955	Uncharacterized protein. (980 aa)
	JCGZ_12102	N-acetyltransferase domain-containing protein. (109 aa)
	JCGZ_15339	N-acetyltransferase domain-containing protein. (233 aa)
	JCGZ_07324	Uncharacterized protein. (464 aa)
	JCGZ_07044	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. (139 aa)
	JCGZ_16226	N-acetyltransferase domain-containing protein. (241 aa)
	JCGZ_12030	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (443 aa)
	JCGZ_07407	WD_REPEATS_REGION domain-containing protein. (495 aa)
	JCGZ_07207	N-acetyltransferase domain-containing protein. (162 aa)
	JCGZ_12553	RuvB-like helicase; Belongs to the RuvB family. (466 aa)
	JCGZ_12462	MRG domain-containing protein. (318 aa)
	JCGZ_19292	NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily. (405 aa)
	JCGZ_14064	SANT domain-containing protein. (492 aa)
	JCGZ_22559	Uncharacterized protein. (1524 aa)
	JCGZ_23467	Uncharacterized protein. (219 aa)
	JCGZ_23367	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (415 aa)
	JCGZ_19627	Uncharacterized protein. (273 aa)
	JCGZ_18075	zf-C3Hc3H domain-containing protein. (246 aa)
	JCGZ_17729	Uncharacterized protein. (1059 aa)
	JCGZ_20469	Abhydrolase_5 domain-containing protein. (229 aa)
	JCGZ_17539	HSA domain-containing protein. (2039 aa)
	JCGZ_00631	N-acetyltransferase domain-containing protein. (243 aa)
	JCGZ_22668	Uncharacterized protein. (678 aa)
	JCGZ_22270	Uncharacterized protein. (181 aa)
	JCGZ_21512	Uncharacterized protein. (473 aa)
	JCGZ_21382	Bromo domain-containing protein. (473 aa)
	JCGZ_05274	Bromo domain-containing protein. (643 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_01025	JCGZ_12030	A0A067KWD8	A0A067KCM9	Deacetylase sirtuin-type domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.709
JCGZ_01025	JCGZ_19292	A0A067KWD8	A0A067K333	Deacetylase sirtuin-type domain-containing protein.	NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily.	0.962
JCGZ_02329	JCGZ_06510	A0A067KVW0	A0A067LED4	Uncharacterized protein.	Uncharacterized protein.	0.819
JCGZ_02329	JCGZ_12030	A0A067KVW0	A0A067KCM9	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.992
JCGZ_02329	JCGZ_12462	A0A067KVW0	A0A067K6X7	Uncharacterized protein.	MRG domain-containing protein.	0.930
JCGZ_02329	JCGZ_12553	A0A067KVW0	A0A067K7J0	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.786
JCGZ_02329	JCGZ_14064	A0A067KVW0	A0A067JZU0	Uncharacterized protein.	SANT domain-containing protein.	0.981
JCGZ_02329	JCGZ_15939	A0A067KVW0	A0A067KZC1	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.830
JCGZ_02329	JCGZ_16081	A0A067KVW0	A0A067LC62	Uncharacterized protein.	MRG domain-containing protein.	0.930
JCGZ_02329	JCGZ_17539	A0A067KVW0	A0A067JQZ4	Uncharacterized protein.	HSA domain-containing protein.	0.456
JCGZ_02329	JCGZ_19627	A0A067KVW0	A0A067JUP0	Uncharacterized protein.	Uncharacterized protein.	0.819
JCGZ_02329	JCGZ_23467	A0A067KVW0	A0A067JVT2	Uncharacterized protein.	Uncharacterized protein.	0.819
JCGZ_02543	JCGZ_06510	A0A067KWZ6	A0A067LED4	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.594
JCGZ_02543	JCGZ_10235	A0A067KWZ6	A0A067LNG5	N-acetyltransferase domain-containing protein.	SGF29 C-terminal domain-containing protein.	0.869
JCGZ_02543	JCGZ_16226	A0A067KWZ6	A0A067KEJ7	N-acetyltransferase domain-containing protein.	N-acetyltransferase domain-containing protein.	0.560
JCGZ_02543	JCGZ_19627	A0A067KWZ6	A0A067JUP0	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.594
JCGZ_02543	JCGZ_23467	A0A067KWZ6	A0A067JVT2	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.594
JCGZ_06510	JCGZ_02329	A0A067LED4	A0A067KVW0	Uncharacterized protein.	Uncharacterized protein.	0.819
JCGZ_06510	JCGZ_02543	A0A067LED4	A0A067KWZ6	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.594
JCGZ_06510	JCGZ_07044	A0A067LED4	A0A067KEN7	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	0.591