12 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_14334	RING-type domain-containing protein. (577 aa)
	JCGZ_19413	BTP domain-containing protein. (241 aa)
	JCGZ_19958	BTP domain-containing protein. (376 aa)
	JCGZ_16539	BTP domain-containing protein. (356 aa)
	JCGZ_10559	VQ domain-containing protein. (202 aa)
	JCGZ_23672	Uncharacterized protein. (77 aa)
	JCGZ_10420	Uncharacterized protein. (73 aa)
	JCGZ_24535	FMN_red domain-containing protein. (192 aa)
	JCGZ_24536	FMN_red domain-containing protein. (199 aa)
	JCGZ_24537	FMN_red domain-containing protein. (197 aa)
	JCGZ_08631	VQ domain-containing protein. (249 aa)
	JCGZ_21453	VQ domain-containing protein. (267 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_08631	JCGZ_10559	A0A067J918	A0A067KSI4	VQ domain-containing protein.	VQ domain-containing protein.	0.429
JCGZ_10559	JCGZ_08631	A0A067KSI4	A0A067J918	VQ domain-containing protein.	VQ domain-containing protein.	0.429
JCGZ_16539	JCGZ_19413	A0A067KA37	A0A067K2R3	BTP domain-containing protein.	BTP domain-containing protein.	0.904
JCGZ_16539	JCGZ_19958	A0A067KA37	A0A067K645	BTP domain-containing protein.	BTP domain-containing protein.	0.903
JCGZ_19413	JCGZ_16539	A0A067K2R3	A0A067KA37	BTP domain-containing protein.	BTP domain-containing protein.	0.904
JCGZ_19413	JCGZ_19958	A0A067K2R3	A0A067K645	BTP domain-containing protein.	BTP domain-containing protein.	0.904
JCGZ_19958	JCGZ_16539	A0A067K645	A0A067KA37	BTP domain-containing protein.	BTP domain-containing protein.	0.903
JCGZ_19958	JCGZ_19413	A0A067K645	A0A067K2R3	BTP domain-containing protein.	BTP domain-containing protein.	0.904