95 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_18049	Calreticulin. (423 aa)
	JCGZ_05915	Uncharacterized protein. (477 aa)
	JCGZ_21512	Uncharacterized protein. (473 aa)
	JCGZ_21629	MACPF domain-containing protein. (558 aa)
	JCGZ_26253	Uncharacterized protein. (378 aa)
	JCGZ_23530	AT-hook motif nuclear-localized protein; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs). (285 aa)
	JCGZ_23581	Uncharacterized protein. (1929 aa)
	JCGZ_21471	MACPF domain-containing protein. (600 aa)
	JCGZ_24189	LRRNT_2 domain-containing protein. (405 aa)
	JCGZ_22468	Uncharacterized protein. (493 aa)
	JCGZ_17520	AvrRpt-cleavage domain-containing protein. (277 aa)
	WRKY57	WRKY transcription factor 57.2. (290 aa)
	WRKY43	WRKY transcription factor 43.1. (344 aa)
	JCGZ_10791	Uncharacterized protein. (335 aa)
	JCGZ_09644	Uncharacterized protein. (590 aa)
	JCGZ_01279	Uncharacterized protein. (803 aa)
	JCGZ_19211	E3 ubiquitin protein ligase. (880 aa)
	JCGZ_16333	Uncharacterized protein. (460 aa)
	JCGZ_05506	Sulfotransferase; Belongs to the sulfotransferase 1 family. (498 aa)
	JCGZ_20899	Calreticulin. (425 aa)
	JCGZ_23806	Uncharacterized protein. (518 aa)
	JCGZ_09742	LRRNT_2 domain-containing protein. (804 aa)
	JCGZ_04556	Uncharacterized protein. (151 aa)
	JCGZ_02919	F-box domain-containing protein. (367 aa)
	JCGZ_02900	F-box domain-containing protein. (219 aa)
	JCGZ_01418	AT-hook motif nuclear-localized protein; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs). (341 aa)
	JCGZ_03088	Uncharacterized protein. (484 aa)
	JCGZ_09655	Uncharacterized protein. (603 aa)
	JCGZ_02292	PPC domain-containing protein. (189 aa)
	JCGZ_02077	F-box domain-containing protein. (441 aa)
	JCGZ_02203	Uncharacterized protein. (883 aa)
	JCGZ_01101	AvrRpt-cleavage domain-containing protein. (259 aa)
	JCGZ_02690	Uncharacterized protein. (474 aa)
	JCGZ_02903	F-box domain-containing protein. (394 aa)
	JCGZ_00706	Cyclic nucleotide-binding domain-containing protein. (698 aa)
	JCGZ_01097	F-box domain-containing protein. (356 aa)
	JCGZ_03988	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1198 aa)
	JCGZ_24927	LRRNT_2 domain-containing protein. (679 aa)
	JCGZ_06919	Helicase C-terminal domain-containing protein. (227 aa)
	JCGZ_03612	Uncharacterized protein. (632 aa)
	JCGZ_24855	Uncharacterized protein. (635 aa)
	JCGZ_08006	Uncharacterized protein. (652 aa)
	JCGZ_05000	Uncharacterized protein. (1644 aa)
	JCGZ_04781	MACPF domain-containing protein. (593 aa)
	JCGZ_09439	Uncharacterized protein. (233 aa)
	JCGZ_05347	Uncharacterized protein. (253 aa)
	JCGZ_11131	Uncharacterized protein. (255 aa)
	JCGZ_06918	HA2 domain-containing protein. (280 aa)
	JCGZ_03989	Uncharacterized protein. (217 aa)
	JCGZ_07170	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1199 aa)
	JCGZ_07531	Flavin-containing monooxygenase. (550 aa)
	JCGZ_07866	Uncharacterized protein. (300 aa)
	JCGZ_06917	Uncharacterized protein. (200 aa)
	JCGZ_07186	Homeobox domain-containing protein. (365 aa)
	JCGZ_07176	Uncharacterized protein. (574 aa)
	JCGZ_13700	F-box domain-containing protein. (413 aa)
	JCGZ_06760	Uncharacterized protein. (479 aa)
	JCGZ_06128	Uncharacterized protein. (359 aa)
	JCGZ_13324	Uncharacterized protein. (1239 aa)
	JCGZ_07895	LRRNT_2 domain-containing protein. (1017 aa)
	JCGZ_07870	Uncharacterized protein. (790 aa)
	JCGZ_10954	Uncharacterized protein. (759 aa)
	JCGZ_13727	LysM domain-containing protein. (228 aa)
	JCGZ_09210	DRBM domain-containing protein. (940 aa)
	JCGZ_11985	Uncharacterized protein. (147 aa)
	JCGZ_16971	Uncharacterized protein. (124 aa)
	JCGZ_12862	Uncharacterized protein. (529 aa)
	JCGZ_13535	Protein kinase domain-containing protein. (396 aa)
	JCGZ_12820	Uncharacterized protein. (485 aa)
	JCGZ_07573	Flavin-containing monooxygenase. (523 aa)
	JCGZ_07563	SEC7 domain-containing protein. (1791 aa)
	JCGZ_07442	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (356 aa)
	JCGZ_19288	Uncharacterized protein. (123 aa)
	JCGZ_07063	Uncharacterized protein. (152 aa)
	JCGZ_19289	EDS1_EP domain-containing protein. (394 aa)
	JCGZ_12279	Uncharacterized protein. (649 aa)
	JCGZ_14631	VASt domain-containing protein. (662 aa)
	JCGZ_14085	Uncharacterized protein. (263 aa)
	JCGZ_13401	Uncharacterized protein. (277 aa)
	JCGZ_11539	Uncharacterized protein. (598 aa)
	JCGZ_13726	Protein kinase domain-containing protein. (270 aa)
	JCGZ_20116	Uncharacterized protein. (315 aa)
	JCGZ_16218	Uncharacterized protein. (603 aa)
	JCGZ_19903	Cyclic nucleotide-binding domain-containing protein. (770 aa)
	JCGZ_19904	Cyclic nucleotide-binding domain-containing protein. (441 aa)
	JCGZ_19302	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1018 aa)
	JCGZ_17608	Uncharacterized protein. (507 aa)
	JCGZ_16973	Uncharacterized protein. (884 aa)
	JCGZ_14614	E3 ubiquitin protein ligase. (878 aa)
	JCGZ_19937	FBA_1 domain-containing protein. (215 aa)
	JCGZ_14197	Uncharacterized protein. (479 aa)
	JCGZ_13918	Uncharacterized protein. (327 aa)
	CDC5	MYB family protein. (996 aa)
	JCGZ_23448	Uncharacterized protein. (843 aa)
	JCGZ_23248	Uncharacterized protein. (571 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC5	JCGZ_05347	A0A067JUS2	A0A067KSC7	MYB family protein.	Uncharacterized protein.	0.993
CDC5	JCGZ_06917	A0A067JUS2	A0A067KMW6	MYB family protein.	Uncharacterized protein.	0.855
CDC5	JCGZ_06918	A0A067JUS2	A0A067KR35	MYB family protein.	HA2 domain-containing protein.	0.855
CDC5	JCGZ_06919	A0A067JUS2	A0A067L046	MYB family protein.	Helicase C-terminal domain-containing protein.	0.855
CDC5	JCGZ_10791	A0A067JUS2	A0A067LR30	MYB family protein.	Uncharacterized protein.	0.855
CDC5	JCGZ_12862	A0A067JUS2	A0A067KEA4	MYB family protein.	Uncharacterized protein.	0.994
CDC5	JCGZ_13401	A0A067JUS2	A0A067K8A3	MYB family protein.	Uncharacterized protein.	0.855
CDC5	JCGZ_16218	A0A067JUS2	A0A067K6J8	MYB family protein.	Uncharacterized protein.	0.855
CDC5	JCGZ_22468	A0A067JUS2	A0A067JQU3	MYB family protein.	Uncharacterized protein.	0.461
JCGZ_01101	JCGZ_17520	A0A067L5G7	A0A067JR54	AvrRpt-cleavage domain-containing protein.	AvrRpt-cleavage domain-containing protein.	0.903
JCGZ_01279	JCGZ_13324	A0A067LKE0	A0A067KKQ7	Uncharacterized protein.	Uncharacterized protein.	0.986
JCGZ_01279	JCGZ_21512	A0A067LKE0	A0A067JB56	Uncharacterized protein.	Uncharacterized protein.	0.445
JCGZ_02690	JCGZ_09210	A0A067L599	A0A067KFL8	Uncharacterized protein.	DRBM domain-containing protein.	0.446
JCGZ_05000	JCGZ_18049	A0A067KV48	A0A067JSF2	Uncharacterized protein.	Calreticulin.	0.535
JCGZ_05000	JCGZ_20899	A0A067KV48	A0A067LI32	Uncharacterized protein.	Calreticulin.	0.535
JCGZ_05000	JCGZ_23581	A0A067KV48	A0A067JLU1	Uncharacterized protein.	Uncharacterized protein.	0.404
JCGZ_05347	CDC5	A0A067KSC7	A0A067JUS2	Uncharacterized protein.	MYB family protein.	0.993
JCGZ_05347	JCGZ_06917	A0A067KSC7	A0A067KMW6	Uncharacterized protein.	Uncharacterized protein.	0.524
JCGZ_05347	JCGZ_06918	A0A067KSC7	A0A067KR35	Uncharacterized protein.	HA2 domain-containing protein.	0.524
JCGZ_05347	JCGZ_06919	A0A067KSC7	A0A067L046	Uncharacterized protein.	Helicase C-terminal domain-containing protein.	0.524