35 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_07916	Cupin_8 domain-containing protein. (232 aa)
	JCGZ_07907	BHLH domain-containing protein. (399 aa)
	JCGZ_21172	Uncharacterized protein. (224 aa)
	JCGZ_21497	Uncharacterized protein. (485 aa)
	JCGZ_22017	Uncharacterized protein. (435 aa)
	JCGZ_21341	Uncharacterized protein. (1040 aa)
	JCGZ_21415	Uncharacterized protein. (1249 aa)
	JCGZ_19627	Uncharacterized protein. (273 aa)
	JCGZ_18642	Uncharacterized protein. (217 aa)
	JCGZ_11562	Uncharacterized protein. (545 aa)
	JCGZ_12462	MRG domain-containing protein. (318 aa)
	JCGZ_12069	Uncharacterized protein. (441 aa)
	JCGZ_07703	Uncharacterized protein. (718 aa)
	JCGZ_12220	Uncharacterized protein. (474 aa)
	JCGZ_08319	Uncharacterized protein. (1168 aa)
	JCGZ_08870	Bromo domain-containing protein. (768 aa)
	JCGZ_07000	Uncharacterized protein. (435 aa)
	JCGZ_00878	Uncharacterized protein. (413 aa)
	JCGZ_00903	Bromo domain-containing protein. (895 aa)
	JCGZ_10941	BHLH domain-containing protein. (267 aa)
	JCGZ_04258	Uncharacterized protein. (256 aa)
	JCGZ_09388	CBFD_NFYB_HMF domain-containing protein. (176 aa)
	JCGZ_08075	Bromo domain-containing protein. (711 aa)
	JCGZ_06818	BHLH domain-containing protein. (370 aa)
	JCGZ_26764	Uncharacterized protein. (216 aa)
	JCGZ_01597	Uncharacterized protein. (301 aa)
	JCGZ_16894	Uncharacterized protein. (255 aa)
	JCGZ_02327	Photolyase/cryptochrome alpha/beta domain-containing protein. (647 aa)
	JCGZ_24819	Uncharacterized protein. (766 aa)
	JCGZ_03234	Uncharacterized protein. (468 aa)
	JCGZ_20073	Uncharacterized protein. (1624 aa)
	JCGZ_01888	JmjC domain-containing protein. (370 aa)
	JCGZ_06510	Uncharacterized protein. (282 aa)
	JCGZ_16731	BHLH domain-containing protein. (421 aa)
	JHL06B08.10	JHL06B08.10 protein. (254 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00878	JCGZ_00903	A0A067KSC5	A0A067KSE9	Uncharacterized protein.	Bromo domain-containing protein.	0.459
JCGZ_00903	JCGZ_00878	A0A067KSE9	A0A067KSC5	Bromo domain-containing protein.	Uncharacterized protein.	0.459
JCGZ_00903	JCGZ_04258	A0A067KSE9	A0A067KTP7	Bromo domain-containing protein.	Uncharacterized protein.	0.403
JCGZ_01888	JCGZ_20073	A0A067LC81	A0A067LAY8	JmjC domain-containing protein.	Uncharacterized protein.	0.478
JCGZ_02327	JCGZ_07703	A0A067L8A7	A0A067KDC6	Photolyase/cryptochrome alpha/beta domain-containing protein.	Uncharacterized protein.	0.933
JCGZ_02327	JCGZ_08319	A0A067L8A7	A0A067KK87	Photolyase/cryptochrome alpha/beta domain-containing protein.	Uncharacterized protein.	0.840
JCGZ_02327	JCGZ_24819	A0A067L8A7	A0A067L8K0	Photolyase/cryptochrome alpha/beta domain-containing protein.	Uncharacterized protein.	0.933
JCGZ_04258	JCGZ_00903	A0A067KTP7	A0A067KSE9	Uncharacterized protein.	Bromo domain-containing protein.	0.403
JCGZ_04258	JCGZ_20073	A0A067KTP7	A0A067LAY8	Uncharacterized protein.	Uncharacterized protein.	0.809
JCGZ_06510	JCGZ_12462	A0A067LED4	A0A067K6X7	Uncharacterized protein.	MRG domain-containing protein.	0.659
JCGZ_07703	JCGZ_02327	A0A067KDC6	A0A067L8A7	Uncharacterized protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.933
JCGZ_07703	JCGZ_08319	A0A067KDC6	A0A067KK87	Uncharacterized protein.	Uncharacterized protein.	0.950
JCGZ_07703	JCGZ_24819	A0A067KDC6	A0A067L8K0	Uncharacterized protein.	Uncharacterized protein.	0.900
JCGZ_07916	JCGZ_20073	A0A067J8S4	A0A067LAY8	Cupin_8 domain-containing protein.	Uncharacterized protein.	0.566
JCGZ_08319	JCGZ_02327	A0A067KK87	A0A067L8A7	Uncharacterized protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.840
JCGZ_08319	JCGZ_07703	A0A067KK87	A0A067KDC6	Uncharacterized protein.	Uncharacterized protein.	0.950
JCGZ_08319	JCGZ_24819	A0A067KK87	A0A067L8K0	Uncharacterized protein.	Uncharacterized protein.	0.950
JCGZ_12462	JCGZ_06510	A0A067K6X7	A0A067LED4	MRG domain-containing protein.	Uncharacterized protein.	0.659
JCGZ_12462	JCGZ_19627	A0A067K6X7	A0A067JUP0	MRG domain-containing protein.	Uncharacterized protein.	0.659
JCGZ_12462	JCGZ_20073	A0A067K6X7	A0A067LAY8	MRG domain-containing protein.	Uncharacterized protein.	0.658