55 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_18978	Uncharacterized protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (255 aa)
	JCGZ_16156	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (530 aa)
	JCGZ_13785	TAF domain-containing protein. (540 aa)
	JCGZ_11708	Uncharacterized protein. (631 aa)
	JCGZ_13073	TAFII28 domain-containing protein. (214 aa)
	JCGZ_07447	WD_REPEATS_REGION domain-containing protein. (328 aa)
	JCGZ_24859	Uncharacterized protein. (515 aa)
	JCGZ_02197	CDC73_C domain-containing protein. (127 aa)
	JCGZ_03950	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (533 aa)
	JCGZ_22328	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1546 aa)
	JCGZ_02928	Uncharacterized protein. (176 aa)
	JCGZ_07562	Uncharacterized protein. (901 aa)
	JCGZ_07044	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. (139 aa)
	JCGZ_09190	RNA_pol_L_2 domain-containing protein. (170 aa)
	JCGZ_07094	Uncharacterized protein. (670 aa)
	JCGZ_09447	Protein kinase domain-containing protein. (590 aa)
	JCGZ_08334	Protein kinase domain-containing protein. (588 aa)
	JCGZ_10470	HTH TFE/IIEalpha-type domain-containing protein. (473 aa)
	JCGZ_13184	Uncharacterized protein. (599 aa)
	JCGZ_12081	Uncharacterized protein. (296 aa)
	JCGZ_07475	TPR_REGION domain-containing protein. (1066 aa)
	JCGZ_06319	RING-type domain-containing protein. (343 aa)
	JCGZ_00964	TAF domain-containing protein. (537 aa)
	JCGZ_24695	Uncharacterized protein. (175 aa)
	JCGZ_15913	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (106 aa)
	JCGZ_02281	Uncharacterized protein. (1012 aa)
	JCGZ_01859	RPOLA_N domain-containing protein. (1378 aa)
	JCGZ_01895	TAFII55_N domain-containing protein. (199 aa)
	JCGZ_02941	Uncharacterized protein. (407 aa)
	JCGZ_05353	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (417 aa)
	JCGZ_04068	MAT1 domain-containing protein. (180 aa)
	JCGZ_23666	TFIID_20kDa domain-containing protein. (535 aa)
	JCGZ_23918	Uncharacterized protein. (410 aa)
	JHL18I08.10	JHL18I08.10 protein. (262 aa)
	JCGZ_17312	Uncharacterized protein. (242 aa)
	JCGZ_17307	TFA2_Winged_2 domain-containing protein. (237 aa)
	JCGZ_04067	Uncharacterized protein. (918 aa)
	JCGZ_05562	C2H2-type domain-containing protein. (208 aa)
	JCGZ_07963	HTH TFE/IIEalpha-type domain-containing protein. (474 aa)
	JCGZ_06480	Uncharacterized protein. (1600 aa)
	JCGZ_16046	Uncharacterized protein. (917 aa)
	JCGZ_24953	Uncharacterized protein. (1909 aa)
	JCGZ_05475	Uncharacterized protein. (166 aa)
	JCGZ_05851	Uncharacterized protein. (611 aa)
	JCGZ_21437	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (841 aa)
	JCGZ_21423	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (450 aa)
	JCGZ_21409	Plus3 domain-containing protein. (658 aa)
	JCGZ_23334	CYCLIN domain-containing protein; Belongs to the cyclin family. (350 aa)
	JCGZ_24708	TFIID_20kDa domain-containing protein. (633 aa)
	JCGZ_20563	Uncharacterized protein. (771 aa)
	JCGZ_23953	Uncharacterized protein. (275 aa)
	JCGZ_20629	TFIIE beta domain-containing protein. (281 aa)
	JCGZ_19651	Uncharacterized protein. (1700 aa)
	JCGZ_23577	RPOL4c domain-containing protein. (164 aa)
	JCGZ_25337	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1462 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00964	JCGZ_01859	A0A067KSX9	A0A067L0S8	TAF domain-containing protein.	RPOLA_N domain-containing protein.	0.489
JCGZ_00964	JCGZ_01895	A0A067KSX9	A0A067L104	TAF domain-containing protein.	TAFII55_N domain-containing protein.	0.991
JCGZ_00964	JCGZ_02928	A0A067KSX9	A0A067L4T0	TAF domain-containing protein.	Uncharacterized protein.	0.632
JCGZ_00964	JCGZ_02941	A0A067KSX9	A0A067L1A3	TAF domain-containing protein.	Uncharacterized protein.	0.856
JCGZ_00964	JCGZ_03950	A0A067KSX9	A0A067L7G8	TAF domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.811
JCGZ_00964	JCGZ_04067	A0A067KSX9	A0A067L3T5	TAF domain-containing protein.	Uncharacterized protein.	0.776
JCGZ_00964	JCGZ_04068	A0A067KSX9	A0A067L2M4	TAF domain-containing protein.	MAT1 domain-containing protein.	0.776
JCGZ_00964	JCGZ_05353	A0A067KSX9	A0A067L1C4	TAF domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.803
JCGZ_00964	JCGZ_05475	A0A067KSX9	A0A067L9T2	TAF domain-containing protein.	Uncharacterized protein.	0.632
JCGZ_00964	JCGZ_05562	A0A067KSX9	A0A067LHM1	TAF domain-containing protein.	C2H2-type domain-containing protein.	0.869
JCGZ_00964	JCGZ_05851	A0A067KSX9	A0A067J8P8	TAF domain-containing protein.	Uncharacterized protein.	0.991
JCGZ_00964	JCGZ_07044	A0A067KSX9	A0A067KEN7	TAF domain-containing protein.	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	0.987
JCGZ_00964	JCGZ_07094	A0A067KSX9	A0A067KET0	TAF domain-containing protein.	Uncharacterized protein.	0.987
JCGZ_00964	JCGZ_07562	A0A067KSX9	A0A067KCN8	TAF domain-containing protein.	Uncharacterized protein.	0.970
JCGZ_00964	JCGZ_07963	A0A067KSX9	A0A067LEP3	TAF domain-containing protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.832
JCGZ_00964	JCGZ_09190	A0A067KSX9	A0A067KFJ8	TAF domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.784
JCGZ_00964	JCGZ_10470	A0A067KSX9	A0A067KL60	TAF domain-containing protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.832
JCGZ_00964	JCGZ_12081	A0A067KSX9	A0A067KLW9	TAF domain-containing protein.	Uncharacterized protein.	0.847
JCGZ_00964	JCGZ_13073	A0A067KSX9	A0A067KAP7	TAF domain-containing protein.	TAFII28 domain-containing protein.	0.991
JCGZ_00964	JCGZ_13184	A0A067KSX9	A0A067KLF7	TAF domain-containing protein.	Uncharacterized protein.	0.841