28 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_18443	Uncharacterized protein. (286 aa)
	JCGZ_17652	TPR_REGION domain-containing protein. (711 aa)
	JCGZ_17883	RGS domain-containing protein. (202 aa)
	JCGZ_22655	Uncharacterized protein. (134 aa)
	JCGZ_19618	Uncharacterized protein. (96 aa)
	JCGZ_25641	Rab-GAP TBC domain-containing protein. (361 aa)
	JCGZ_17520	AvrRpt-cleavage domain-containing protein. (277 aa)
	JCGZ_05254	Uncharacterized protein. (391 aa)
	JCGZ_17095	Uncharacterized protein. (863 aa)
	JCGZ_10085	WD_REPEATS_REGION domain-containing protein. (377 aa)
	JCGZ_05437	Uncharacterized protein. (443 aa)
	JCGZ_10031	Uncharacterized protein. (936 aa)
	JCGZ_16032	Uncharacterized protein. (352 aa)
	JCGZ_05435	Uncharacterized protein. (528 aa)
	JCGZ_24653	Uncharacterized protein. (120 aa)
	JCGZ_05659	Uncharacterized protein. (449 aa)
	JCGZ_01101	AvrRpt-cleavage domain-containing protein. (259 aa)
	JCGZ_16025	TPR_REGION domain-containing protein. (714 aa)
	JCGZ_02365	TPR_REGION domain-containing protein. (731 aa)
	JCGZ_05231	Uncharacterized protein. (701 aa)
	JCGZ_07954	PH domain-containing protein. (851 aa)
	JCGZ_12306	Uncharacterized protein. (925 aa)
	JCGZ_07524	Uncharacterized protein. (125 aa)
	JCGZ_07588	Uncharacterized protein. (384 aa)
	JCGZ_13403	Uncharacterized protein. (335 aa)
	JCGZ_19619	Uncharacterized protein. (95 aa)
	JCGZ_19614	Uncharacterized protein. (96 aa)
	JCGZ_11763	Uncharacterized protein. (262 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_01101	JCGZ_17520	A0A067L5G7	A0A067JR54	AvrRpt-cleavage domain-containing protein.	AvrRpt-cleavage domain-containing protein.	0.903
JCGZ_07588	JCGZ_10085	A0A067KD02	A0A067LN60	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.949
JCGZ_07588	JCGZ_17883	A0A067KD02	A0A067K3C2	Uncharacterized protein.	RGS domain-containing protein.	0.889
JCGZ_07954	JCGZ_10085	A0A067KMS0	A0A067LN60	PH domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.934
JCGZ_07954	JCGZ_17883	A0A067KMS0	A0A067K3C2	PH domain-containing protein.	RGS domain-containing protein.	0.512
JCGZ_10031	JCGZ_10085	A0A067LCJ0	A0A067LN60	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.948
JCGZ_10031	JCGZ_17883	A0A067LCJ0	A0A067K3C2	Uncharacterized protein.	RGS domain-containing protein.	0.634
JCGZ_10085	JCGZ_07588	A0A067LN60	A0A067KD02	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.949
JCGZ_10085	JCGZ_07954	A0A067LN60	A0A067KMS0	WD_REPEATS_REGION domain-containing protein.	PH domain-containing protein.	0.934
JCGZ_10085	JCGZ_10031	A0A067LN60	A0A067LCJ0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.948
JCGZ_10085	JCGZ_12306	A0A067LN60	A0A067KHW0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.948
JCGZ_10085	JCGZ_17095	A0A067LN60	A0A067K2C2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.934
JCGZ_10085	JCGZ_17883	A0A067LN60	A0A067K3C2	WD_REPEATS_REGION domain-containing protein.	RGS domain-containing protein.	0.577
JCGZ_12306	JCGZ_10085	A0A067KHW0	A0A067LN60	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.948
JCGZ_12306	JCGZ_17883	A0A067KHW0	A0A067K3C2	Uncharacterized protein.	RGS domain-containing protein.	0.599
JCGZ_16032	JCGZ_25641	A0A067LAU8	A0A067JWG4	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.497
JCGZ_17095	JCGZ_10085	A0A067K2C2	A0A067LN60	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.934
JCGZ_17095	JCGZ_17883	A0A067K2C2	A0A067K3C2	Uncharacterized protein.	RGS domain-containing protein.	0.512
JCGZ_17520	JCGZ_01101	A0A067JR54	A0A067L5G7	AvrRpt-cleavage domain-containing protein.	AvrRpt-cleavage domain-containing protein.	0.903
JCGZ_17883	JCGZ_07588	A0A067K3C2	A0A067KD02	RGS domain-containing protein.	Uncharacterized protein.	0.889