69 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_08236	Uncharacterized protein. (150 aa)
	JCGZ_19612	Uncharacterized protein. (63 aa)
	JCGZ_19617	Uncharacterized protein. (94 aa)
	JCGZ_19622	Uncharacterized protein. (95 aa)
	JCGZ_00127	Uncharacterized protein. (120 aa)
	JCGZ_19608	Uncharacterized protein. (99 aa)
	JCGZ_19613	Uncharacterized protein. (100 aa)
	JCGZ_19618	Uncharacterized protein. (96 aa)
	JCGZ_19623	Uncharacterized protein. (94 aa)
	JCGZ_19628	Uncharacterized protein. (104 aa)
	JCGZ_14553	Uncharacterized protein. (168 aa)
	JCGZ_22655	Uncharacterized protein. (134 aa)
	JCGZ_16535	Uncharacterized protein. (76 aa)
	JCGZ_16536	Uncharacterized protein. (128 aa)
	JCGZ_16631	Uncharacterized protein. (112 aa)
	JCGZ_18748	Uncharacterized protein. (148 aa)
	JCGZ_18753	Uncharacterized protein. (105 aa)
	JCGZ_18749	Uncharacterized protein. (148 aa)
	JCGZ_18754	Uncharacterized protein. (144 aa)
	JCGZ_22289	Uncharacterized protein. (110 aa)
	JCGZ_18750	Uncharacterized protein. (153 aa)
	JCGZ_19615	Uncharacterized protein. (94 aa)
	JCGZ_19620	Uncharacterized protein. (96 aa)
	JCGZ_19625	Uncharacterized protein. (96 aa)
	JCGZ_19609	Uncharacterized protein. (101 aa)
	JCGZ_19614	Uncharacterized protein. (96 aa)
	JCGZ_19619	Uncharacterized protein. (95 aa)
	JCGZ_19624	Uncharacterized protein. (100 aa)
	JCGZ_19629	Uncharacterized protein. (139 aa)
	JCGZ_16524	Uncharacterized protein. (122 aa)
	JCGZ_18747	Uncharacterized protein. (147 aa)
	JCGZ_18746	Uncharacterized protein. (144 aa)
	JCGZ_18751	Uncharacterized protein. (148 aa)
	JCGZ_11096	Uncharacterized protein. (99 aa)
	JCGZ_11101	Uncharacterized protein. (101 aa)
	JCGZ_11097	Uncharacterized protein. (102 aa)
	JCGZ_11102	Uncharacterized protein. (90 aa)
	JCGZ_09195	Uncharacterized protein. (104 aa)
	JCGZ_07524	Uncharacterized protein. (125 aa)
	JCGZ_11098	Uncharacterized protein. (99 aa)
	JCGZ_11103	Uncharacterized protein. (100 aa)
	JCGZ_07998	Uncharacterized protein. (134 aa)
	JCGZ_06991	Uncharacterized protein. (168 aa)
	JCGZ_07526	Uncharacterized protein. (158 aa)
	JCGZ_08129	Uncharacterized protein. (118 aa)
	JCGZ_08234	Uncharacterized protein. (106 aa)
	JCGZ_11095	Uncharacterized protein. (100 aa)
	JCGZ_11100	Uncharacterized protein. (100 aa)
	JCGZ_11094	Uncharacterized protein. (100 aa)
	JCGZ_11099	C2 domain-containing protein. (294 aa)
	JCGZ_11104	Uncharacterized protein. (98 aa)
	JCGZ_08131	Uncharacterized protein. (147 aa)
	JCGZ_06769	Uncharacterized protein. (146 aa)
	JCGZ_02361	Uncharacterized protein. (128 aa)
	JCGZ_02614	Uncharacterized protein. (124 aa)
	JCGZ_05458	Uncharacterized protein. (121 aa)
	JCGZ_24654	Uncharacterized protein. (105 aa)
	JCGZ_24653	Uncharacterized protein. (120 aa)
	JCGZ_06509	Uncharacterized protein. (104 aa)
	JCGZ_00055	Uncharacterized protein. (139 aa)
	JCGZ_22576	Uncharacterized protein. (176 aa)
	JCGZ_22626	Uncharacterized protein. (142 aa)
	JCGZ_25564	Uncharacterized protein. (112 aa)
	JCGZ_26411	Uncharacterized protein. (175 aa)
	JCGZ_20779	Uncharacterized protein. (164 aa)
	JCGZ_18010	Uncharacterized protein. (175 aa)
	JCGZ_19611	Uncharacterized protein. (102 aa)
	JCGZ_19616	Uncharacterized protein. (217 aa)
	JCGZ_19621	Uncharacterized protein. (96 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_05458	JCGZ_11102	A0A067L688	A0A067KEK1	Uncharacterized protein.	Uncharacterized protein.	0.405
JCGZ_07524	JCGZ_09195	A0A067KG18	A0A067KFK2	Uncharacterized protein.	Uncharacterized protein.	0.492
JCGZ_09195	JCGZ_07524	A0A067KFK2	A0A067KG18	Uncharacterized protein.	Uncharacterized protein.	0.492
JCGZ_09195	JCGZ_24653	A0A067KFK2	A0A067L984	Uncharacterized protein.	Uncharacterized protein.	0.498
JCGZ_11094	JCGZ_16631	A0A067KRT9	A0A067JZG3	Uncharacterized protein.	Uncharacterized protein.	0.411
JCGZ_11095	JCGZ_16631	A0A067KQG9	A0A067JZG3	Uncharacterized protein.	Uncharacterized protein.	0.429
JCGZ_11095	JCGZ_26411	A0A067KQG9	A0A067JRG1	Uncharacterized protein.	Uncharacterized protein.	0.419
JCGZ_11096	JCGZ_16536	A0A067KE86	A0A067JZ24	Uncharacterized protein.	Uncharacterized protein.	0.486
JCGZ_11096	JCGZ_16631	A0A067KE86	A0A067JZG3	Uncharacterized protein.	Uncharacterized protein.	0.400
JCGZ_11096	JCGZ_26411	A0A067KE86	A0A067JRG1	Uncharacterized protein.	Uncharacterized protein.	0.407
JCGZ_11097	JCGZ_26411	A0A067KEJ4	A0A067JRG1	Uncharacterized protein.	Uncharacterized protein.	0.432
JCGZ_11098	JCGZ_16536	A0A067KHQ4	A0A067JZ24	Uncharacterized protein.	Uncharacterized protein.	0.500
JCGZ_11099	JCGZ_16536	A0A067KRU3	A0A067JZ24	C2 domain-containing protein.	Uncharacterized protein.	0.510
JCGZ_11102	JCGZ_05458	A0A067KEK1	A0A067L688	Uncharacterized protein.	Uncharacterized protein.	0.405
JCGZ_11102	JCGZ_16536	A0A067KEK1	A0A067JZ24	Uncharacterized protein.	Uncharacterized protein.	0.473
JCGZ_11102	JCGZ_16631	A0A067KEK1	A0A067JZG3	Uncharacterized protein.	Uncharacterized protein.	0.417
JCGZ_11102	JCGZ_20779	A0A067KEK1	A0A067JS07	Uncharacterized protein.	Uncharacterized protein.	0.466
JCGZ_11102	JCGZ_26411	A0A067KEK1	A0A067JRG1	Uncharacterized protein.	Uncharacterized protein.	0.427
JCGZ_11103	JCGZ_26411	A0A067KHQ9	A0A067JRG1	Uncharacterized protein.	Uncharacterized protein.	0.416
JCGZ_16536	JCGZ_11096	A0A067JZ24	A0A067KE86	Uncharacterized protein.	Uncharacterized protein.	0.486