(7 nodes) Aromatic-L-amino-acid decarboxylase network (Jatropha curcas)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_06875	Uncharacterized protein. (465 aa)
	JCGZ_22267	Uncharacterized protein. (516 aa)
	JCGZ_17611	Uncharacterized protein. (490 aa)
	JCGZ_04664	Uncharacterized protein. (511 aa)
	JCGZ_04665	Uncharacterized protein. (511 aa)
	JCGZ_05108	Uncharacterized protein. (498 aa)
	JCGZ_05111	Uncharacterized protein. (498 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_05108	JCGZ_05111	A0A067KRP2	A0A067L2R2	Uncharacterized protein.	Uncharacterized protein.	0.602
JCGZ_05108	JCGZ_06875	A0A067KRP2	A0A067JLC0	Uncharacterized protein.	Uncharacterized protein.	0.608
JCGZ_05108	JCGZ_17611	A0A067KRP2	A0A067JUG5	Uncharacterized protein.	Uncharacterized protein.	0.608
JCGZ_05108	JCGZ_22267	A0A067KRP2	A0A067JTN6	Uncharacterized protein.	Uncharacterized protein.	0.608
JCGZ_05111	JCGZ_05108	A0A067L2R2	A0A067KRP2	Uncharacterized protein.	Uncharacterized protein.	0.602
JCGZ_05111	JCGZ_06875	A0A067L2R2	A0A067JLC0	Uncharacterized protein.	Uncharacterized protein.	0.608
JCGZ_05111	JCGZ_17611	A0A067L2R2	A0A067JUG5	Uncharacterized protein.	Uncharacterized protein.	0.608
JCGZ_05111	JCGZ_22267	A0A067L2R2	A0A067JTN6	Uncharacterized protein.	Uncharacterized protein.	0.607
JCGZ_06875	JCGZ_05108	A0A067JLC0	A0A067KRP2	Uncharacterized protein.	Uncharacterized protein.	0.608
JCGZ_06875	JCGZ_05111	A0A067JLC0	A0A067L2R2	Uncharacterized protein.	Uncharacterized protein.	0.608
JCGZ_06875	JCGZ_17611	A0A067JLC0	A0A067JUG5	Uncharacterized protein.	Uncharacterized protein.	0.608
JCGZ_06875	JCGZ_22267	A0A067JLC0	A0A067JTN6	Uncharacterized protein.	Uncharacterized protein.	0.607
JCGZ_17611	JCGZ_05108	A0A067JUG5	A0A067KRP2	Uncharacterized protein.	Uncharacterized protein.	0.608
JCGZ_17611	JCGZ_05111	A0A067JUG5	A0A067L2R2	Uncharacterized protein.	Uncharacterized protein.	0.608
JCGZ_17611	JCGZ_06875	A0A067JUG5	A0A067JLC0	Uncharacterized protein.	Uncharacterized protein.	0.608
JCGZ_17611	JCGZ_22267	A0A067JUG5	A0A067JTN6	Uncharacterized protein.	Uncharacterized protein.	0.607
JCGZ_22267	JCGZ_05108	A0A067JTN6	A0A067KRP2	Uncharacterized protein.	Uncharacterized protein.	0.608
JCGZ_22267	JCGZ_05111	A0A067JTN6	A0A067L2R2	Uncharacterized protein.	Uncharacterized protein.	0.607
JCGZ_22267	JCGZ_06875	A0A067JTN6	A0A067JLC0	Uncharacterized protein.	Uncharacterized protein.	0.607
JCGZ_22267	JCGZ_17611	A0A067JTN6	A0A067JUG5	Uncharacterized protein.	Uncharacterized protein.	0.607