7 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_18053	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (417 aa)
	JCGZ_26782	Uncharacterized protein. (489 aa)
	JCGZ_00012	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (175 aa)
	JCGZ_18054	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (417 aa)
	JCGZ_18055	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (416 aa)
	JCGZ_19638	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (724 aa)
	JCGZ_08157	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (355 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00012	JCGZ_19638	A0A067J8R4	A0A067JXU8	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	0.521
JCGZ_08157	JCGZ_19638	A0A067KKU5	A0A067JXU8	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	0.653
JCGZ_18053	JCGZ_19638	A0A067K3Q7	A0A067JXU8	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	0.524
JCGZ_18054	JCGZ_19638	A0A067JSF7	A0A067JXU8	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	0.521
JCGZ_18055	JCGZ_19638	A0A067JSN5	A0A067JXU8	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	0.521
JCGZ_19638	JCGZ_00012	A0A067JXU8	A0A067J8R4	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.521
JCGZ_19638	JCGZ_08157	A0A067JXU8	A0A067KKU5	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.653
JCGZ_19638	JCGZ_18053	A0A067JXU8	A0A067K3Q7	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.524
JCGZ_19638	JCGZ_18054	A0A067JXU8	A0A067JSF7	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.521
JCGZ_19638	JCGZ_18055	A0A067JXU8	A0A067JSN5	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.521
JCGZ_19638	JCGZ_26782	A0A067JXU8	A0A067LCH2	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	Uncharacterized protein.	0.447
JCGZ_26782	JCGZ_19638	A0A067LCH2	A0A067JXU8	Uncharacterized protein.	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	0.447