7 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_21696	Uncharacterized protein. (276 aa)
	JCGZ_12533	Uncharacterized protein. (276 aa)
	JCGZ_11584	Uncharacterized protein. (249 aa)
	JCGZ_24475	Uncharacterized protein. (318 aa)
	JCGZ_09591	Uncharacterized protein. (164 aa)
	JCGZ_16031	Uncharacterized protein. (277 aa)
	JCGZ_09722	Uncharacterized protein. (274 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_09722	JCGZ_24475	A0A067LDZ7	A0A067KW88	Uncharacterized protein.	Uncharacterized protein.	0.802
JCGZ_11584	JCGZ_24475	A0A067K8A1	A0A067KW88	Uncharacterized protein.	Uncharacterized protein.	0.802
JCGZ_12533	JCGZ_24475	A0A067K7H3	A0A067KW88	Uncharacterized protein.	Uncharacterized protein.	0.808
JCGZ_16031	JCGZ_24475	A0A067LBZ3	A0A067KW88	Uncharacterized protein.	Uncharacterized protein.	0.808
JCGZ_21696	JCGZ_24475	A0A067JML0	A0A067KW88	Uncharacterized protein.	Uncharacterized protein.	0.802
JCGZ_24475	JCGZ_09722	A0A067KW88	A0A067LDZ7	Uncharacterized protein.	Uncharacterized protein.	0.802
JCGZ_24475	JCGZ_11584	A0A067KW88	A0A067K8A1	Uncharacterized protein.	Uncharacterized protein.	0.802
JCGZ_24475	JCGZ_12533	A0A067KW88	A0A067K7H3	Uncharacterized protein.	Uncharacterized protein.	0.808
JCGZ_24475	JCGZ_16031	A0A067KW88	A0A067LBZ3	Uncharacterized protein.	Uncharacterized protein.	0.808
JCGZ_24475	JCGZ_21696	A0A067KW88	A0A067JML0	Uncharacterized protein.	Uncharacterized protein.	0.802