32 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_21289	Uncharacterized protein. (263 aa)
	JCGZ_21288	Uncharacterized protein. (655 aa)
	JCGZ_21283	Uncharacterized protein. (673 aa)
	JCGZ_21278	Uncharacterized protein. (859 aa)
	JCGZ_21287	Uncharacterized protein. (670 aa)
	JCGZ_21282	Uncharacterized protein. (1279 aa)
	JCGZ_15124	Uncharacterized protein. (258 aa)
	JCGZ_15125	Gnk2-homologous domain-containing protein. (222 aa)
	JCGZ_07983	Uncharacterized protein. (629 aa)
	JCGZ_09565	Uncharacterized protein. (669 aa)
	JCGZ_15593	Uncharacterized protein. (322 aa)
	JCGZ_04745	Uncharacterized protein. (286 aa)
	JCGZ_12864	Uncharacterized protein. (293 aa)
	JCGZ_11449	Uncharacterized protein. (610 aa)
	JCGZ_12567	Uncharacterized protein. (241 aa)
	JCGZ_17783	Uncharacterized protein. (615 aa)
	JCGZ_17633	Uncharacterized protein. (301 aa)
	JCGZ_22904	Uncharacterized protein. (243 aa)
	JCGZ_20775	Uncharacterized protein. (231 aa)
	JCGZ_21053	Gnk2-homologous domain-containing protein. (185 aa)
	JCGZ_22512	Uncharacterized protein. (277 aa)
	JCGZ_14552	Uncharacterized protein. (289 aa)
	JCGZ_23562	Uncharacterized protein. (292 aa)
	JCGZ_17784	Uncharacterized protein. (657 aa)
	JCGZ_21945	Gnk2-homologous domain-containing protein. (197 aa)
	JCGZ_22906	Uncharacterized protein. (226 aa)
	JCGZ_21285	Uncharacterized protein. (326 aa)
	JCGZ_21280	Uncharacterized protein. (457 aa)
	JCGZ_21286	Uncharacterized protein. (661 aa)
	JCGZ_00134	Uncharacterized protein. (504 aa)
	JCGZ_00133	Gnk2-homologous domain-containing protein. (124 aa)
	JCGZ_21284	Uncharacterized protein. (315 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_04745	JCGZ_21053	A0A067KPM7	A0A067K184	Uncharacterized protein.	Gnk2-homologous domain-containing protein.	0.442
JCGZ_12567	JCGZ_23562	A0A067K786	A0A067JW46	Uncharacterized protein.	Uncharacterized protein.	0.498
JCGZ_12864	JCGZ_22906	A0A067KM14	A0A067JPH9	Uncharacterized protein.	Uncharacterized protein.	0.460
JCGZ_17633	JCGZ_21053	A0A067K2H9	A0A067K184	Uncharacterized protein.	Gnk2-homologous domain-containing protein.	0.416
JCGZ_21053	JCGZ_04745	A0A067K184	A0A067KPM7	Gnk2-homologous domain-containing protein.	Uncharacterized protein.	0.442
JCGZ_21053	JCGZ_17633	A0A067K184	A0A067K2H9	Gnk2-homologous domain-containing protein.	Uncharacterized protein.	0.416
JCGZ_21053	JCGZ_23562	A0A067K184	A0A067JW46	Gnk2-homologous domain-containing protein.	Uncharacterized protein.	0.455
JCGZ_21284	JCGZ_23562	A0A067JDJ2	A0A067JW46	Uncharacterized protein.	Uncharacterized protein.	0.409
JCGZ_22904	JCGZ_23562	A0A067K243	A0A067JW46	Uncharacterized protein.	Uncharacterized protein.	0.469
JCGZ_22906	JCGZ_12864	A0A067JPH9	A0A067KM14	Uncharacterized protein.	Uncharacterized protein.	0.460
JCGZ_22906	JCGZ_23562	A0A067JPH9	A0A067JW46	Uncharacterized protein.	Uncharacterized protein.	0.517
JCGZ_23562	JCGZ_12567	A0A067JW46	A0A067K786	Uncharacterized protein.	Uncharacterized protein.	0.498
JCGZ_23562	JCGZ_21053	A0A067JW46	A0A067K184	Uncharacterized protein.	Gnk2-homologous domain-containing protein.	0.455
JCGZ_23562	JCGZ_21284	A0A067JW46	A0A067JDJ2	Uncharacterized protein.	Uncharacterized protein.	0.409
JCGZ_23562	JCGZ_22904	A0A067JW46	A0A067K243	Uncharacterized protein.	Uncharacterized protein.	0.469
JCGZ_23562	JCGZ_22906	A0A067JW46	A0A067JPH9	Uncharacterized protein.	Uncharacterized protein.	0.517