41 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_14477	Uncharacterized protein. (1129 aa)
	JHL05D22.3	JHL05D22.3 protein. (558 aa)
	PLDa	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (808 aa)
	GPDH	Glycerol-3-phosphate dehydrogenase [NAD(+)]. (394 aa)
	JCGZ_22331	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (863 aa)
	JCGZ_22332	RRM domain-containing protein. (227 aa)
	JCGZ_10058	PlsC domain-containing protein. (335 aa)
	JCGZ_01483	Uncharacterized protein. (314 aa)
	JCGZ_17218	Uncharacterized protein. (333 aa)
	JCGZ_22330	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (821 aa)
	JCGZ_24789	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (915 aa)
	JCGZ_25458	Uncharacterized protein. (280 aa)
	JCGZ_05688	Uncharacterized protein. (311 aa)
	GPAT-2	PlsC domain-containing protein. (375 aa)
	JCGZ_04038	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. (358 aa)
	JCGZ_02101	Uncharacterized protein. (274 aa)
	LPAT	PlsC domain-containing protein. (385 aa)
	JCGZ_08160	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (854 aa)
	JCGZ_06146	Uncharacterized protein. (170 aa)
	JCGZ_00879	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. (299 aa)
	JCGZ_04969	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (855 aa)
	JCGZ_04386	PlsC domain-containing protein. (268 aa)
	JCGZ_12893	Uncharacterized protein. (345 aa)
	JCGZ_05941	Uncharacterized protein. (179 aa)
	JCGZ_07166	Uncharacterized protein. (156 aa)
	JCGZ_06143	Uncharacterized protein. (135 aa)
	JCGZ_09332	Uncharacterized protein. (259 aa)
	JCGZ_07168	PLD phosphodiesterase domain-containing protein. (238 aa)
	JCGZ_07167	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (816 aa)
	JCGZ_13337	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (810 aa)
	JCGZ_13341	Uncharacterized protein. (173 aa)
	JCGZ_21122	Glycerol-3-phosphate dehydrogenase [NAD(+)]. (462 aa)
	JCGZ_16155	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (629 aa)
	JCGZ_20700	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (852 aa)
	JCGZ_21958	Uncharacterized protein. (269 aa)
	JCGZ_03312	Glycerol-3-phosphate dehydrogenase [NAD(+)]. (426 aa)
	JCGZ_25913	PlsC domain-containing protein. (406 aa)
	JCGZ_23065	Uncharacterized protein. (263 aa)
	JCGZ_23266	PLD phosphodiesterase domain-containing protein. (196 aa)
	JCGZ_19581	Uncharacterized protein. (317 aa)
	JCGZ_18927	Phospholipase. (1105 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GPAT-2	GPDH	A0A067L437	A0A067LNE6	PlsC domain-containing protein.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.785
GPAT-2	JCGZ_00879	A0A067L437	A0A067KSK2	PlsC domain-containing protein.	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.	0.872
GPAT-2	JCGZ_03312	A0A067L437	A0A067JCT3	PlsC domain-containing protein.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.796
GPAT-2	JCGZ_04038	A0A067L437	A0A067L2I4	PlsC domain-containing protein.	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.	0.909
GPAT-2	JCGZ_04386	A0A067L437	A0A067KQG7	PlsC domain-containing protein.	PlsC domain-containing protein.	0.796
GPAT-2	JCGZ_05941	A0A067L437	A0A067KMZ0	PlsC domain-containing protein.	Uncharacterized protein.	0.464
GPAT-2	JCGZ_10058	A0A067L437	A0A067LG25	PlsC domain-containing protein.	PlsC domain-containing protein.	0.441
GPAT-2	JCGZ_16155	A0A067L437	A0A067K2M6	PlsC domain-containing protein.	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.	0.925
GPAT-2	JCGZ_19581	A0A067L437	A0A067JUD3	PlsC domain-containing protein.	Uncharacterized protein.	0.413
GPAT-2	JCGZ_21122	A0A067L437	A0A067K2R6	PlsC domain-containing protein.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.804
GPAT-2	JCGZ_25913	A0A067L437	A0A067JE27	PlsC domain-containing protein.	PlsC domain-containing protein.	0.484
GPAT-2	LPAT	A0A067L437	A0A067KYK4	PlsC domain-containing protein.	PlsC domain-containing protein.	0.902
GPDH	GPAT-2	A0A067LNE6	A0A067L437	Glycerol-3-phosphate dehydrogenase [NAD(+)].	PlsC domain-containing protein.	0.785
GPDH	JCGZ_00879	A0A067LNE6	A0A067KSK2	Glycerol-3-phosphate dehydrogenase [NAD(+)].	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.	0.888
GPDH	JCGZ_03312	A0A067LNE6	A0A067JCT3	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.903
GPDH	JCGZ_04038	A0A067LNE6	A0A067L2I4	Glycerol-3-phosphate dehydrogenase [NAD(+)].	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.	0.891
GPDH	JCGZ_04386	A0A067LNE6	A0A067KQG7	Glycerol-3-phosphate dehydrogenase [NAD(+)].	PlsC domain-containing protein.	0.872
GPDH	JCGZ_16155	A0A067LNE6	A0A067K2M6	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.	0.973
GPDH	JCGZ_21122	A0A067LNE6	A0A067K2R6	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.901
GPDH	JHL05D22.3	A0A067LNE6	E6NU22	Glycerol-3-phosphate dehydrogenase [NAD(+)].	JHL05D22.3 protein.	0.413