23 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_23355	Uncharacterized protein. (218 aa)
	JCGZ_09030	Histone H2B; Belongs to the histone H2B family. (139 aa)
	JCGZ_05673	Histone H2B; Belongs to the histone H2B family. (152 aa)
	JCGZ_01566	Histone H2B; Belongs to the histone H2B family. (138 aa)
	JCGZ_02034	BRCT domain-containing protein. (1160 aa)
	JCGZ_03237	Uncharacterized protein. (481 aa)
	JCGZ_05414	Histone domain-containing protein; Belongs to the histone H2B family. (259 aa)
	JCGZ_03239	DNA_ligase_A_N domain-containing protein. (123 aa)
	JCGZ_05422	Histone H2B; Belongs to the histone H2B family. (143 aa)
	JCGZ_05667	Histone H2B; Belongs to the histone H2B family. (147 aa)
	JCGZ_11186	Uncharacterized protein. (257 aa)
	JCGZ_14575	Cyclin; Belongs to the cyclin family. (224 aa)
	JCGZ_07693	Uncharacterized protein. (258 aa)
	JCGZ_17133	Histone domain-containing protein; Belongs to the histone H2B family. (112 aa)
	JCGZ_14652	Cyclin; Belongs to the cyclin family. (206 aa)
	JCGZ_14522	ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. (685 aa)
	JCGZ_25651	Uncharacterized protein. (544 aa)
	JCGZ_23352	Uncharacterized protein. (359 aa)
	JCGZ_22020	BRCT domain-containing protein. (949 aa)
	JCGZ_22897	Cyclin; Belongs to the cyclin family. (219 aa)
	JCGZ_21930	Cyclin; Belongs to the cyclin family. (219 aa)
	JCGZ_21271	Uncharacterized protein. (657 aa)
	JCGZ_26314	Cyclin; Belongs to the cyclin family. (202 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_01566	JCGZ_14522	A0A067L9C8	A0A067JXT2	Histone H2B; Belongs to the histone H2B family.	ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase.	0.439
JCGZ_02034	JCGZ_07693	A0A067KUZ0	A0A067KDB2	BRCT domain-containing protein.	Uncharacterized protein.	0.591
JCGZ_02034	JCGZ_14522	A0A067KUZ0	A0A067JXT2	BRCT domain-containing protein.	ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase.	0.724
JCGZ_03237	JCGZ_11186	A0A067KY67	A0A067KSL8	Uncharacterized protein.	Uncharacterized protein.	0.972
JCGZ_03237	JCGZ_14522	A0A067KY67	A0A067JXT2	Uncharacterized protein.	ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase.	0.984
JCGZ_03237	JCGZ_14575	A0A067KY67	A0A067KAG8	Uncharacterized protein.	Cyclin; Belongs to the cyclin family.	0.655
JCGZ_03237	JCGZ_14652	A0A067KY67	A0A067JY35	Uncharacterized protein.	Cyclin; Belongs to the cyclin family.	0.655
JCGZ_03237	JCGZ_21271	A0A067KY67	A0A067JLC5	Uncharacterized protein.	Uncharacterized protein.	0.757
JCGZ_03237	JCGZ_21930	A0A067KY67	A0A067JPJ0	Uncharacterized protein.	Cyclin; Belongs to the cyclin family.	0.655
JCGZ_03237	JCGZ_22897	A0A067KY67	A0A067JPR0	Uncharacterized protein.	Cyclin; Belongs to the cyclin family.	0.655
JCGZ_03237	JCGZ_23352	A0A067KY67	A0A067JVF3	Uncharacterized protein.	Uncharacterized protein.	0.655
JCGZ_03237	JCGZ_23355	A0A067KY67	A0A067JI17	Uncharacterized protein.	Uncharacterized protein.	0.655
JCGZ_03237	JCGZ_26314	A0A067KY67	A0A067JI41	Uncharacterized protein.	Cyclin; Belongs to the cyclin family.	0.655
JCGZ_03239	JCGZ_11186	A0A067LAH5	A0A067KSL8	DNA_ligase_A_N domain-containing protein.	Uncharacterized protein.	0.972
JCGZ_03239	JCGZ_14522	A0A067LAH5	A0A067JXT2	DNA_ligase_A_N domain-containing protein.	ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase.	0.984
JCGZ_03239	JCGZ_14575	A0A067LAH5	A0A067KAG8	DNA_ligase_A_N domain-containing protein.	Cyclin; Belongs to the cyclin family.	0.655
JCGZ_03239	JCGZ_14652	A0A067LAH5	A0A067JY35	DNA_ligase_A_N domain-containing protein.	Cyclin; Belongs to the cyclin family.	0.655
JCGZ_03239	JCGZ_21271	A0A067LAH5	A0A067JLC5	DNA_ligase_A_N domain-containing protein.	Uncharacterized protein.	0.757
JCGZ_03239	JCGZ_21930	A0A067LAH5	A0A067JPJ0	DNA_ligase_A_N domain-containing protein.	Cyclin; Belongs to the cyclin family.	0.655
JCGZ_03239	JCGZ_22897	A0A067LAH5	A0A067JPR0	DNA_ligase_A_N domain-containing protein.	Cyclin; Belongs to the cyclin family.	0.655