61 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_21297	Uncharacterized protein. (412 aa)
	JCGZ_13466	DUF5311 domain-containing protein. (1513 aa)
	JCGZ_09743	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (253 aa)
	JCGZ_01279	Uncharacterized protein. (803 aa)
	JCGZ_19499	Uncharacterized protein. (209 aa)
	JCGZ_01260	FCP1 homology domain-containing protein. (297 aa)
	JCGZ_05667	Histone H2B; Belongs to the histone H2B family. (147 aa)
	JCGZ_05422	Histone H2B; Belongs to the histone H2B family. (143 aa)
	JCGZ_10256	Uncharacterized protein. (1787 aa)
	JCGZ_01566	Histone H2B; Belongs to the histone H2B family. (138 aa)
	JCGZ_24669	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1090 aa)
	JCGZ_22916	Uncharacterized protein. (1303 aa)
	JCGZ_05678	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	JCGZ_05673	Histone H2B; Belongs to the histone H2B family. (152 aa)
	JCGZ_05629	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	JCGZ_05414	Histone domain-containing protein; Belongs to the histone H2B family. (259 aa)
	JCGZ_00157	Uncharacterized protein. (293 aa)
	JCGZ_01792	Uncharacterized protein. (181 aa)
	JCGZ_00791	C2H2-type domain-containing protein. (434 aa)
	JCGZ_26594	Uncharacterized protein. (80 aa)
	JCGZ_27016	WD_REPEATS_REGION domain-containing protein. (349 aa)
	JCGZ_27006	Nuclear pore protein. (863 aa)
	JCGZ_24877	Nuclear pore complex protein NUP35. (332 aa)
	JCGZ_04758	Uncharacterized protein. (1493 aa)
	JCGZ_27015	Peptidase S59 domain-containing protein. (1067 aa)
	JCGZ_06909	TPR_MLP1_2 domain-containing protein. (2087 aa)
	JCGZ_04407	Uncharacterized protein. (1101 aa)
	JCGZ_04292	LNS2 domain-containing protein. (1382 aa)
	JCGZ_07726	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (724 aa)
	JCGZ_08573	Uncharacterized protein. (311 aa)
	JCGZ_06207	Histone H2A; Belongs to the histone H2A family. (134 aa)
	JCGZ_13324	Uncharacterized protein. (1239 aa)
	JCGZ_12531	Uncharacterized protein. (1244 aa)
	JCGZ_09030	Histone H2B; Belongs to the histone H2B family. (139 aa)
	JCGZ_11939	Uncharacterized protein. (533 aa)
	JCGZ_11616	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (272 aa)
	JCGZ_16396	Uncharacterized protein. (184 aa)
	JCGZ_17133	Histone domain-containing protein; Belongs to the histone H2B family. (112 aa)
	JCGZ_07203	Histone H2A; Belongs to the histone H2A family. (134 aa)
	JCGZ_13273	Histone H2A; Belongs to the histone H2A family. (137 aa)
	JCGZ_19334	Uncharacterized protein. (1300 aa)
	JCGZ_13702	Uncharacterized protein. (311 aa)
	JCGZ_19472	Uncharacterized protein. (450 aa)
	JCGZ_13834	Uncharacterized protein. (314 aa)
	JCGZ_19848	Structural maintenance of chromosomes protein. (1239 aa)
	JCGZ_17957	FCP1 homology domain-containing protein. (467 aa)
	JCGZ_22093	Uncharacterized protein. (186 aa)
	JCGZ_20675	RanBD1 domain-containing protein. (502 aa)
	JCGZ_25009	FCP1 homology domain-containing protein. (316 aa)
	JCGZ_18912	Uncharacterized protein. (682 aa)
	JCGZ_18886	Uncharacterized protein. (254 aa)
	JCGZ_00146	Uncharacterized protein. (314 aa)
	JCGZ_19586	Uncharacterized protein. (645 aa)
	JCGZ_17945	Nup54 domain-containing protein. (403 aa)
	JCGZ_21855	Histone H2A; Belongs to the histone H2A family. (138 aa)
	JCGZ_21670	FCP1 homology domain-containing protein. (487 aa)
	JCGZ_20337	Peptidase S59 domain-containing protein. (1035 aa)
	JCGZ_21621	FCP1 homology domain-containing protein. (296 aa)
	JCGZ_25480	Uncharacterized protein. (563 aa)
	JCGZ_26233	Uncharacterized protein. (1120 aa)
	JCGZ_21607	Uncharacterized protein. (320 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00146	JCGZ_00157	A0A067JUZ7	A0A067L619	Uncharacterized protein.	Uncharacterized protein.	0.684
JCGZ_00146	JCGZ_00791	A0A067JUZ7	A0A067L4L6	Uncharacterized protein.	C2H2-type domain-containing protein.	0.737
JCGZ_00146	JCGZ_01279	A0A067JUZ7	A0A067LKE0	Uncharacterized protein.	Uncharacterized protein.	0.811
JCGZ_00146	JCGZ_04758	A0A067JUZ7	A0A067L0V0	Uncharacterized protein.	Uncharacterized protein.	0.856
JCGZ_00146	JCGZ_06909	A0A067JUZ7	A0A067L032	Uncharacterized protein.	TPR_MLP1_2 domain-containing protein.	0.585
JCGZ_00146	JCGZ_07726	A0A067JUZ7	A0A067KPE9	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.843
JCGZ_00146	JCGZ_10256	A0A067JUZ7	A0A067LD56	Uncharacterized protein.	Uncharacterized protein.	0.649
JCGZ_00146	JCGZ_13324	A0A067JUZ7	A0A067KKQ7	Uncharacterized protein.	Uncharacterized protein.	0.863
JCGZ_00146	JCGZ_13466	A0A067JUZ7	A0A067LMI2	Uncharacterized protein.	DUF5311 domain-containing protein.	0.770
JCGZ_00146	JCGZ_17945	A0A067JUZ7	A0A067JSD8	Uncharacterized protein.	Nup54 domain-containing protein.	0.854
JCGZ_00146	JCGZ_19334	A0A067JUZ7	A0A067KB49	Uncharacterized protein.	Uncharacterized protein.	0.684
JCGZ_00146	JCGZ_19472	A0A067JUZ7	A0A067K8B6	Uncharacterized protein.	Uncharacterized protein.	0.582
JCGZ_00146	JCGZ_19586	A0A067JUZ7	A0A067JUD8	Uncharacterized protein.	Uncharacterized protein.	0.667
JCGZ_00146	JCGZ_20337	A0A067JUZ7	A0A067JMH5	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.684
JCGZ_00146	JCGZ_20675	A0A067JUZ7	A0A067K141	Uncharacterized protein.	RanBD1 domain-containing protein.	0.666
JCGZ_00146	JCGZ_21297	A0A067JUZ7	A0A067JAI8	Uncharacterized protein.	Uncharacterized protein.	0.737
JCGZ_00146	JCGZ_21607	A0A067JUZ7	A0A067JBF2	Uncharacterized protein.	Uncharacterized protein.	0.684
JCGZ_00146	JCGZ_24669	A0A067JUZ7	A0A067L851	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.849
JCGZ_00146	JCGZ_24877	A0A067JUZ7	A0A067L0W8	Uncharacterized protein.	Nuclear pore complex protein NUP35.	0.710
JCGZ_00146	JCGZ_27006	A0A067JUZ7	A0A067L413	Uncharacterized protein.	Nuclear pore protein.	0.863