27 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_16325	Uncharacterized protein. (80 aa)
	JCGZ_05749	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (138 aa)
	JCGZ_05743	Uncharacterized protein. (109 aa)
	JCGZ_23778	Uncharacterized protein. (191 aa)
	JCGZ_24735	Uncharacterized protein. (458 aa)
	JCGZ_24555	Uncharacterized protein. (662 aa)
	JCGZ_01055	RPOLD domain-containing protein. (376 aa)
	JCGZ_03407	WAT1-related protein. (350 aa)
	JCGZ_02757	Uncharacterized protein. (609 aa)
	JCGZ_08938	Uncharacterized protein. (224 aa)
	JCGZ_06801	RPOLA_N domain-containing protein. (1526 aa)
	JCGZ_08237	Uncharacterized protein. (229 aa)
	JCGZ_09049	SANTA domain-containing protein. (588 aa)
	JCGZ_07277	Uncharacterized protein. (206 aa)
	JCGZ_18860	Uncharacterized protein. (190 aa)
	JCGZ_13730	Uncharacterized protein. (206 aa)
	JCGZ_22486	Uncharacterized protein. (238 aa)
	JCGZ_21088	Uncharacterized protein. (256 aa)
	JCGZ_26150	Uncharacterized protein. (149 aa)
	JCGZ_18225	Uncharacterized protein. (191 aa)
	JCGZ_10967	Phorbol-ester/DAG-type domain-containing protein. (568 aa)
	JCGZ_23792	SANTA domain-containing protein. (331 aa)
	JCGZ_26773	Uncharacterized protein. (628 aa)
	JCGZ_05745	Uncharacterized protein. (146 aa)
	JCGZ_05470	Uncharacterized protein. (611 aa)
	JCGZ_20928	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (146 aa)
	JCGZ_24513	Uncharacterized protein. (227 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_01055	JCGZ_02757	A0A067KWG0	A0A067KUF3	RPOLD domain-containing protein.	Uncharacterized protein.	0.606
JCGZ_01055	JCGZ_03407	A0A067KWG0	A0A067KUJ1	RPOLD domain-containing protein.	WAT1-related protein.	0.568
JCGZ_01055	JCGZ_05470	A0A067KWG0	A0A067L9S7	RPOLD domain-containing protein.	Uncharacterized protein.	0.606
JCGZ_01055	JCGZ_05743	A0A067KWG0	A0A067L757	RPOLD domain-containing protein.	Uncharacterized protein.	0.969
JCGZ_01055	JCGZ_05745	A0A067KWG0	A0A067LAQ0	RPOLD domain-containing protein.	Uncharacterized protein.	0.969
JCGZ_01055	JCGZ_05749	A0A067KWG0	A0A067L7B6	RPOLD domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	0.969
JCGZ_01055	JCGZ_06801	A0A067KWG0	A0A067KMK3	RPOLD domain-containing protein.	RPOLA_N domain-containing protein.	0.987
JCGZ_01055	JCGZ_07277	A0A067KWG0	A0A067KBZ2	RPOLD domain-containing protein.	Uncharacterized protein.	0.978
JCGZ_01055	JCGZ_08237	A0A067KWG0	A0A067KL18	RPOLD domain-containing protein.	Uncharacterized protein.	0.999
JCGZ_01055	JCGZ_08938	A0A067KWG0	A0A067KT96	RPOLD domain-containing protein.	Uncharacterized protein.	0.606
JCGZ_01055	JCGZ_09049	A0A067KWG0	A0A067KH99	RPOLD domain-containing protein.	SANTA domain-containing protein.	0.929
JCGZ_01055	JCGZ_10967	A0A067KWG0	A0A067LH36	RPOLD domain-containing protein.	Phorbol-ester/DAG-type domain-containing protein.	0.929
JCGZ_01055	JCGZ_13730	A0A067KWG0	A0A067K3V6	RPOLD domain-containing protein.	Uncharacterized protein.	0.978
JCGZ_01055	JCGZ_16325	A0A067KWG0	A0A067L7U6	RPOLD domain-containing protein.	Uncharacterized protein.	0.929
JCGZ_01055	JCGZ_18225	A0A067KWG0	A0A067LLD4	RPOLD domain-containing protein.	Uncharacterized protein.	0.987
JCGZ_01055	JCGZ_18860	A0A067KWG0	A0A067K6A1	RPOLD domain-containing protein.	Uncharacterized protein.	0.987
JCGZ_01055	JCGZ_20928	A0A067KWG0	A0A067L9K4	RPOLD domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	0.969
JCGZ_01055	JCGZ_21088	A0A067KWG0	A0A067K1C2	RPOLD domain-containing protein.	Uncharacterized protein.	0.929
JCGZ_01055	JCGZ_22486	A0A067KWG0	A0A067K1X8	RPOLD domain-containing protein.	Uncharacterized protein.	0.978
JCGZ_01055	JCGZ_23778	A0A067KWG0	A0A067L302	RPOLD domain-containing protein.	Uncharacterized protein.	0.929