78 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_13862	Uncharacterized protein. (269 aa)
	JCGZ_02834	NAC domain-containing protein. (157 aa)
	JCGZ_20643	AAA domain-containing protein. (335 aa)
	JCGZ_25568	Uncharacterized protein. (268 aa)
	JCGZ_25567	Uncharacterized protein. (330 aa)
	JCGZ_05462	Uncharacterized protein. (805 aa)
	JCGZ_08537	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
	JCGZ_05432	Uncharacterized protein. (282 aa)
	JCGZ_10264	WD_REPEATS_REGION domain-containing protein. (507 aa)
	JCGZ_11166	UmuC domain-containing protein. (656 aa)
	JCGZ_02541	NAC transcription factor 076. (378 aa)
	JCGZ_14159	NAC transcription factor 067. (180 aa)
	JCGZ_14162	NAC transcription factor 072. (355 aa)
	NAM	NAC transcription factor 050. (394 aa)
	JCGZ_20334	NAC transcription factor 055. (605 aa)
	JCGZ_23886	NAC transcription factor 070. (147 aa)
	JCGZ_02538	NAC transcription factor 075. (364 aa)
	JCGZ_14164	NAC transcription factor 068. (202 aa)
	JCGZ_14163	NAC transcription factor 073. (375 aa)
	JCGZ_17675	NAC transcription factor 009. (287 aa)
	JCGZ_08268	NAC transcription factor 054. (573 aa)
	JCGZ_14165	NAC transcription factor 069. (201 aa)
	JCGZ_12819	CBFD_NFYB_HMF domain-containing protein. (151 aa)
	JCGZ_04625	CULLIN_2 domain-containing protein; Belongs to the cullin family. (821 aa)
	JCGZ_12928	Uncharacterized protein. (895 aa)
	JCGZ_07246	ANK_REP_REGION domain-containing protein. (481 aa)
	JCGZ_12132	AAA domain-containing protein. (367 aa)
	JCGZ_23444	WD_REPEATS_REGION domain-containing protein. (763 aa)
	JCGZ_23340	DNA polymerase. (1741 aa)
	JCGZ_01925	IMS_C domain-containing protein. (142 aa)
	JCGZ_02835	NAC domain-containing protein. (161 aa)
	JCGZ_21612	AAA domain-containing protein. (1192 aa)
	JCGZ_21403	HORMA domain-containing protein. (209 aa)
	JCGZ_21167	AAA domain-containing protein; Belongs to the AAA ATPase family. (592 aa)
	JCGZ_05910	Uncharacterized protein. (1252 aa)
	JCGZ_14961	Uncharacterized protein. (765 aa)
	JCGZ_11565	Uncharacterized protein. (534 aa)
	JCGZ_07809	Uncharacterized protein. (369 aa)
	JCGZ_11436	Uncharacterized protein; Belongs to the AAA ATPase family. (813 aa)
	JCGZ_13723	Uncharacterized protein. (568 aa)
	JCGZ_07468	Rep-A_N domain-containing protein. (101 aa)
	JCGZ_18365	Uncharacterized protein. (1243 aa)
	JCGZ_14765	NAC domain-containing protein. (61 aa)
	JCGZ_23917	Replication factor C subunit 1. (966 aa)
	JCGZ_17220	Ubiquitin-like domain-containing protein. (156 aa)
	JCGZ_15486	UmuC domain-containing protein. (575 aa)
	JCGZ_16331	UmuC domain-containing protein. (677 aa)
	JCGZ_16344	Uncharacterized protein. (655 aa)
	JCGZ_23815	Uncharacterized protein; Belongs to the AAA ATPase family. (615 aa)
	JCGZ_05433	Uncharacterized protein. (600 aa)
	JCGZ_02579	Uncharacterized protein. (123 aa)
	JCGZ_00971	CDC48_N domain-containing protein. (138 aa)
	JCGZ_02973	Uncharacterized protein. (317 aa)
	JCGZ_24490	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (546 aa)
	JCGZ_02015	Uncharacterized protein. (269 aa)
	JCGZ_02766	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (869 aa)
	JCGZ_02666	AAA domain-containing protein. (354 aa)
	JCGZ_09253	CPSF_A domain-containing protein. (1088 aa)
	JCGZ_10920	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (1142 aa)
	JCGZ_12118	AAA domain-containing protein. (343 aa)
	JCGZ_12083	AAA domain-containing protein. (1253 aa)
	JCGZ_14160	NAC domain-containing protein. (533 aa)
	JCGZ_13167	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (533 aa)
	JCGZ_11729	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (622 aa)
	JCGZ_13362	AAA domain-containing protein. (1273 aa)
	JCGZ_14166	NAC domain-containing protein. (429 aa)
	JCGZ_14161	NAC domain-containing protein. (899 aa)
	JCGZ_11369	DNA_pol3_gamma3 domain-containing protein. (579 aa)
	JCGZ_19639	Uncharacterized protein. (321 aa)
	JCGZ_17773	Ubiquitin-like domain-containing protein. (156 aa)
	JCGZ_22466	Uncharacterized protein. (801 aa)
	JCGZ_23960	Uncharacterized protein. (223 aa)
	JCGZ_16576	Uncharacterized protein. (293 aa)
	JCGZ_16546	Uncharacterized protein; Belongs to the AAA ATPase family. (805 aa)
	JCGZ_25415	Uncharacterized protein. (102 aa)
	JCGZ_24311	Ubiquitin-like domain-containing protein. (163 aa)
	JCGZ_14088	Ubiquitin-like domain-containing protein. (156 aa)
	JCGZ_14167	Uncharacterized protein. (396 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00971	JCGZ_01925	A0A067L584	A0A067JFP5	CDC48_N domain-containing protein.	IMS_C domain-containing protein.	0.450
JCGZ_00971	JCGZ_02973	A0A067L584	A0A067L4X4	CDC48_N domain-containing protein.	Uncharacterized protein.	0.705
JCGZ_00971	JCGZ_08537	A0A067L584	A0A067LNW6	CDC48_N domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.593
JCGZ_00971	JCGZ_11166	A0A067L584	A0A067LPJ2	CDC48_N domain-containing protein.	UmuC domain-containing protein.	0.450
JCGZ_00971	JCGZ_12083	A0A067L584	A0A067K9A1	CDC48_N domain-containing protein.	AAA domain-containing protein.	0.471
JCGZ_00971	JCGZ_12132	A0A067L584	A0A067KKP6	CDC48_N domain-containing protein.	AAA domain-containing protein.	0.538
JCGZ_00971	JCGZ_13723	A0A067L584	A0A067KEW0	CDC48_N domain-containing protein.	Uncharacterized protein.	0.705
JCGZ_00971	JCGZ_14088	A0A067L584	A0A067JWR6	CDC48_N domain-containing protein.	Ubiquitin-like domain-containing protein.	0.547
JCGZ_00971	JCGZ_17220	A0A067L584	A0A067LEE4	CDC48_N domain-containing protein.	Ubiquitin-like domain-containing protein.	0.547
JCGZ_00971	JCGZ_17773	A0A067L584	A0A067K2Y9	CDC48_N domain-containing protein.	Ubiquitin-like domain-containing protein.	0.547
JCGZ_00971	JCGZ_19639	A0A067L584	A0A067K748	CDC48_N domain-containing protein.	Uncharacterized protein.	0.705
JCGZ_00971	JCGZ_23917	A0A067L584	A0A067LEN7	CDC48_N domain-containing protein.	Replication factor C subunit 1.	0.471
JCGZ_00971	JCGZ_24311	A0A067L584	A0A067JY69	CDC48_N domain-containing protein.	Ubiquitin-like domain-containing protein.	0.547
JCGZ_00971	JCGZ_25567	A0A067L584	A0A067JKZ6	CDC48_N domain-containing protein.	Uncharacterized protein.	0.705
JCGZ_00971	JCGZ_25568	A0A067L584	A0A067JL66	CDC48_N domain-containing protein.	Uncharacterized protein.	0.705
JCGZ_01925	JCGZ_00971	A0A067JFP5	A0A067L584	IMS_C domain-containing protein.	CDC48_N domain-containing protein.	0.450
JCGZ_01925	JCGZ_02015	A0A067JFP5	A0A067KV36	IMS_C domain-containing protein.	Uncharacterized protein.	0.501
JCGZ_01925	JCGZ_02579	A0A067JFP5	A0A067L638	IMS_C domain-containing protein.	Uncharacterized protein.	0.488
JCGZ_01925	JCGZ_02666	A0A067JFP5	A0A067KTU7	IMS_C domain-containing protein.	AAA domain-containing protein.	0.589
JCGZ_01925	JCGZ_02973	A0A067JFP5	A0A067L4X4	IMS_C domain-containing protein.	Uncharacterized protein.	0.489