25 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_03040	SET domain-containing protein. (294 aa)
	JCGZ_23060	SET domain-containing protein. (373 aa)
	JCGZ_25916	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (482 aa)
	JCGZ_01832	Lipoyl-binding domain-containing protein. (470 aa)
	JCGZ_19056	Dihydrolipoyl dehydrogenase. (509 aa)
	JCGZ_17723	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (537 aa)
	JCGZ_20287	SET domain-containing protein. (2450 aa)
	JCGZ_18985	Uncharacterized protein. (265 aa)
	JCGZ_18974	Uncharacterized protein. (575 aa)
	JCGZ_12048	Uncharacterized protein. (482 aa)
	JCGZ_12139	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (493 aa)
	JCGZ_12891	Uncharacterized protein. (674 aa)
	JCGZ_13661	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (482 aa)
	JCGZ_18519	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (403 aa)
	JCGZ_07557	Uncharacterized protein. (1044 aa)
	JCGZ_15184	Uncharacterized protein. (233 aa)
	JCGZ_11496	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (541 aa)
	JCGZ_10690	Uncharacterized protein. (265 aa)
	JCGZ_08950	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (412 aa)
	JCGZ_07030	DAO domain-containing protein. (410 aa)
	JCGZ_02677	Uncharacterized protein. (330 aa)
	JCGZ_03479	Uncharacterized protein. (1030 aa)
	JCGZ_00912	Lipoyl-binding domain-containing protein. (469 aa)
	JCGZ_24683	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (508 aa)
	JCGZ_06555	Uncharacterized protein. (309 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00912	JCGZ_01832	A0A067L3S8	A0A067JRX9	Lipoyl-binding domain-containing protein.	Lipoyl-binding domain-containing protein.	0.901
JCGZ_00912	JCGZ_08950	A0A067L3S8	A0A067KHA9	Lipoyl-binding domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.838
JCGZ_00912	JCGZ_12139	A0A067L3S8	A0A067K9R0	Lipoyl-binding domain-containing protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.538
JCGZ_00912	JCGZ_13661	A0A067L3S8	A0A067KCB6	Lipoyl-binding domain-containing protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.538
JCGZ_00912	JCGZ_18519	A0A067L3S8	A0A067KCI0	Lipoyl-binding domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.838
JCGZ_00912	JCGZ_18974	A0A067L3S8	A0A067K7V0	Lipoyl-binding domain-containing protein.	Uncharacterized protein.	0.999
JCGZ_00912	JCGZ_19056	A0A067L3S8	A0A067JVH4	Lipoyl-binding domain-containing protein.	Dihydrolipoyl dehydrogenase.	0.999
JCGZ_00912	JCGZ_24683	A0A067L3S8	A0A067L9C0	Lipoyl-binding domain-containing protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.456
JCGZ_00912	JCGZ_25916	A0A067L3S8	A0A067JQ12	Lipoyl-binding domain-containing protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.538
JCGZ_01832	JCGZ_00912	A0A067JRX9	A0A067L3S8	Lipoyl-binding domain-containing protein.	Lipoyl-binding domain-containing protein.	0.901
JCGZ_01832	JCGZ_08950	A0A067JRX9	A0A067KHA9	Lipoyl-binding domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.838
JCGZ_01832	JCGZ_18519	A0A067JRX9	A0A067KCI0	Lipoyl-binding domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.838
JCGZ_01832	JCGZ_18974	A0A067JRX9	A0A067K7V0	Lipoyl-binding domain-containing protein.	Uncharacterized protein.	0.989
JCGZ_01832	JCGZ_19056	A0A067JRX9	A0A067JVH4	Lipoyl-binding domain-containing protein.	Dihydrolipoyl dehydrogenase.	0.990
JCGZ_02677	JCGZ_03040	A0A067KU34	A0A067JDJ3	Uncharacterized protein.	SET domain-containing protein.	0.902
JCGZ_02677	JCGZ_03479	A0A067KU34	A0A067KY84	Uncharacterized protein.	Uncharacterized protein.	0.901
JCGZ_02677	JCGZ_06555	A0A067KU34	A0A067LEH1	Uncharacterized protein.	Uncharacterized protein.	0.901
JCGZ_02677	JCGZ_12048	A0A067KU34	A0A067K971	Uncharacterized protein.	Uncharacterized protein.	0.908
JCGZ_02677	JCGZ_12891	A0A067KU34	A0A067KB37	Uncharacterized protein.	Uncharacterized protein.	0.907
JCGZ_02677	JCGZ_15184	A0A067KU34	A0A067KEU3	Uncharacterized protein.	Uncharacterized protein.	0.903