(16 nodes) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site network (Halomonas sp. ALS9)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OAL59801.1	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (82 aa)
	OAL59878.1	Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
	OAL59885.1	Glycolate oxidase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)
	OAL58542.1	Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
	OAL58546.1	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (570 aa)
	OAL58557.1	Dihydropyrimidine dehydrogenase subunit B; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
	OAL58613.1	Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	OAL58619.1	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
	OAL58622.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (630 aa)
	OAL58769.1	Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
	queG	tRNA epoxyqueuosine(34) reductase QueG; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. (363 aa)
	rnfB	Electron transport complex subunit RsxB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. (203 aa)
	rnfC	Electron transporter RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (553 aa)
	OAL60403.1	Formate dehydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (933 aa)
	OAL60408.1	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1033 aa)
	OAL60220.1	Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)

Your Current Organism:

Halomonas sp. ALS9

NCBI taxonomy Id: 1805819
Other names: H. sp. ALS9

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OAL58542.1	OAL58546.1	A6R74_06520	A6R74_06540	Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
OAL58542.1	OAL58613.1	A6R74_06520	A6R74_06900	Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.483
OAL58542.1	OAL58622.1	A6R74_06520	A6R74_06945	Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.960
OAL58542.1	OAL58769.1	A6R74_06520	A6R74_07745	Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.684
OAL58542.1	OAL59878.1	A6R74_06520	A6R74_00985	Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.684
OAL58542.1	OAL59885.1	A6R74_06520	A6R74_01045	Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycolate oxidase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.519
OAL58542.1	OAL60220.1	A6R74_06520	A6R74_20335	Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.483
OAL58542.1	OAL60403.1	A6R74_06520	A6R74_19525	Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Formate dehydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	0.986
OAL58542.1	OAL60408.1	A6R74_06520	A6R74_19555	Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
OAL58546.1	OAL58542.1	A6R74_06540	A6R74_06520	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
OAL58546.1	OAL58557.1	A6R74_06540	A6R74_06610	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydropyrimidine dehydrogenase subunit B; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.886
OAL58546.1	OAL58613.1	A6R74_06540	A6R74_06900	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
OAL58546.1	OAL58619.1	A6R74_06540	A6R74_06930	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.831
OAL58546.1	OAL58622.1	A6R74_06540	A6R74_06945	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.881
OAL58546.1	OAL58769.1	A6R74_06540	A6R74_07745	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
OAL58546.1	OAL59801.1	A6R74_06540	A6R74_00555	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.435
OAL58546.1	OAL59878.1	A6R74_06540	A6R74_00985	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
OAL58546.1	OAL59885.1	A6R74_06540	A6R74_01045	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycolate oxidase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.717
OAL58546.1	OAL60220.1	A6R74_06540	A6R74_20335	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
OAL58546.1	OAL60403.1	A6R74_06540	A6R74_19525	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Formate dehydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	0.971