(6 nodes) Mixed, incl. NADP oxidoreductase coenzyme F420-dependent, and Protein hexamerization network (Sphingorhabdus sp. M41)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMO72225.1	3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family. (293 aa)
	AMO73380.1	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
	AMO72226.1	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
	AMO72227.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
	AMO72228.1	Membrane dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
	AMO73381.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)

Your Current Organism:

Sphingorhabdus sp. M41

NCBI taxonomy Id: 1806885
Other names: S. sp. M41

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMO72225.1	AMO72226.1	AZE99_10505	AZE99_10515	3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
AMO72225.1	AMO72227.1	AZE99_10505	AZE99_10520	3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
AMO72225.1	AMO72228.1	AZE99_10505	AZE99_10525	3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.	Membrane dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.594
AMO72225.1	AMO73380.1	AZE99_10505	AZE99_10510	3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	0.792
AMO72225.1	AMO73381.1	AZE99_10505	AZE99_10530	3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
AMO72226.1	AMO72225.1	AZE99_10515	AZE99_10505	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.	0.989
AMO72226.1	AMO72227.1	AZE99_10515	AZE99_10520	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
AMO72226.1	AMO72228.1	AZE99_10515	AZE99_10525	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AMO72226.1	AMO73380.1	AZE99_10515	AZE99_10510	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	0.881
AMO72226.1	AMO73381.1	AZE99_10515	AZE99_10530	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
AMO72227.1	AMO72225.1	AZE99_10520	AZE99_10505	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.	0.824
AMO72227.1	AMO72226.1	AZE99_10520	AZE99_10515	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
AMO72227.1	AMO72228.1	AZE99_10520	AZE99_10525	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
AMO72227.1	AMO73380.1	AZE99_10520	AZE99_10510	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	0.923
AMO72227.1	AMO73381.1	AZE99_10520	AZE99_10530	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AMO72228.1	AMO72225.1	AZE99_10525	AZE99_10505	Membrane dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.	0.594
AMO72228.1	AMO72226.1	AZE99_10525	AZE99_10515	Membrane dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AMO72228.1	AMO72227.1	AZE99_10525	AZE99_10520	Membrane dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
AMO72228.1	AMO73380.1	AZE99_10525	AZE99_10510	Membrane dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	0.773
AMO72228.1	AMO73381.1	AZE99_10525	AZE99_10530	Membrane dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768