STRINGSTRING
GCA_001562055_00710 GCA_001562055_00710 GCA_001562055_01260 GCA_001562055_01260 GCA_001562055_01263 GCA_001562055_01263 GCA_001562055_01266 GCA_001562055_01266 GCA_001562055_01271 GCA_001562055_01271
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_001562055_00710Unannotated protein. (845 aa)
GCA_001562055_01260Unannotated protein. (239 aa)
GCA_001562055_01263Unannotated protein. (157 aa)
GCA_001562055_01266Unannotated protein. (326 aa)
GCA_001562055_01271Unannotated protein. (101 aa)
Your Current Organism:
Pseudovibrio stylochi
NCBI taxonomy Id: 1807766
Other names: KCTC 42384, MCCC 1K00452, P. stylochi, Pseudovibrio sp. UST20140214-052, Pseudovibrio stylochi Zhang et al. 2016, strain UST20140214-052
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