STRINGSTRING
ARA75697.1 ARA75697.1 ARA75834.1 ARA75834.1 ARA75919.1 ARA75919.1 ARA76252.1 ARA76252.1 ARA76279.1 ARA76279.1 ARA77520.1 ARA77520.1 ARA78089.1 ARA78089.1 ARA78206.1 ARA78206.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARA75697.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
ARA75834.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)
ARA75919.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
ARA76252.1Sodium-independent anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (572 aa)
ARA76279.1Gluconate 5-dehydrogenase; Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
ARA77520.1Deoxygluconate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
ARA78089.1Acetoin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (257 aa)
ARA78206.1C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
Your Current Organism:
Pectobacterium brasiliense
NCBI taxonomy Id: 180957
Other names: CFBP 6617, Erwinia carotovora subsp. brasiliensis, LMG 21371, LMG:21371, NCPPB 4609, P. brasiliense, Pectobacterium brasiliense Portier et al. 2019, Pectobacterium brasiliensis, Pectobacterium carotovorum subsp. brasiliense, Pectobacterium carotovorum subsp. brasiliensis, strain 212
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