STRINGSTRING
DSM5745_10107 DSM5745_10107 SPB1 SPB1 DSM5745_10177 DSM5745_10177 DSM5745_10176 DSM5745_10176 DSM5745_10271 DSM5745_10271 DSM5745_09606 DSM5745_09606 DSM5745_08953 DSM5745_08953 DSM5745_09062 DSM5745_09062 DSM5745_08671 DSM5745_08671 DSM5745_08840 DSM5745_08840 DSM5745_07996 DSM5745_07996 YTM1 YTM1 DSM5745_11054 DSM5745_11054 DSM5745_11036 DSM5745_11036 DSM5745_10842 DSM5745_10842 DSM5745_10778 DSM5745_10778 DSM5745_10430 DSM5745_10430 TIF6 TIF6 DSM5745_10568 DSM5745_10568 DSM5745_10473 DSM5745_10473 DSM5745_08248 DSM5745_08248 DSM5745_08119 DSM5745_08119 DSM5745_08227 DSM5745_08227 DSM5745_08247 DSM5745_08247 DSM5745_08373 DSM5745_08373 DSM5745_08421 DSM5745_08421 DSM5745_07429 DSM5745_07429 DSM5745_07056 DSM5745_07056 DSM5745_07130 DSM5745_07130 DSM5745_07342 DSM5745_07342 DSM5745_07412 DSM5745_07412 DSM5745_07343 DSM5745_07343 ERB1 ERB1 DSM5745_06238 DSM5745_06238 DSM5745_06382 DSM5745_06382 DSM5745_06487 DSM5745_06487 DSM5745_06396 DSM5745_06396 DSM5745_06416 DSM5745_06416 DSM5745_06562 DSM5745_06562 DSM5745_06403 DSM5745_06403 DSM5745_06692 DSM5745_06692 DSM5745_06752 DSM5745_06752 DSM5745_05472 DSM5745_05472 DSM5745_05615 DSM5745_05615 DSM5745_05324 DSM5745_05324 DSM5745_05277 DSM5745_05277 DSM5745_04188 DSM5745_04188 DSM5745_04169 DSM5745_04169 DSM5745_04247 DSM5745_04247 DSM5745_04064 DSM5745_04064 DSM5745_04294 DSM5745_04294 DSM5745_03346 DSM5745_03346 DSM5745_03522 DSM5745_03522 DSM5745_03280 DSM5745_03280 DSM5745_01670 DSM5745_01670 DSM5745_01864 DSM5745_01864 DSM5745_01891 DSM5745_01891 DSM5745_01996 DSM5745_01996 DSM5745_02194 DSM5745_02194 DSM5745_02356 DSM5745_02356 DSM5745_02608 DSM5745_02608 DSM5745_00209 DSM5745_00209 DSM5745_00482 DSM5745_00482 DSM5745_00604 DSM5745_00604 NOP7 NOP7 DSM5745_01497 DSM5745_01497 DSM5745_01340 DSM5745_01340
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DSM5745_10107Uncharacterized protein. (378 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (813 aa)
DSM5745_10177Uncharacterized protein. (449 aa)
DSM5745_10176Uncharacterized protein. (359 aa)
DSM5745_10271Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (245 aa)
DSM5745_09606Uncharacterized protein. (435 aa)
DSM5745_08953Uncharacterized protein. (753 aa)
DSM5745_09062Uncharacterized protein. (251 aa)
DSM5745_0867160S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
DSM5745_08840WD repeat-containing protein jip5. (405 aa)
DSM5745_07996KOW domain-containing protein. (134 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (483 aa)
DSM5745_11054Uncharacterized protein. (720 aa)
DSM5745_11036RRM domain-containing protein. (447 aa)
DSM5745_10842Uncharacterized protein. (527 aa)
DSM5745_10778Uncharacterized protein. (485 aa)
DSM5745_10430HIT-type domain-containing protein. (443 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (247 aa)
DSM5745_10568Brix domain-containing protein. (435 aa)
DSM5745_1047360S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (312 aa)
DSM5745_08248Brix domain-containing protein. (359 aa)
DSM5745_08119HIT-type domain-containing protein. (186 aa)
DSM5745_08227WD_REPEATS_REGION domain-containing protein. (515 aa)
DSM5745_08247Uncharacterized protein. (356 aa)
DSM5745_08373Uncharacterized protein. (1121 aa)
DSM5745_08421ATP-dependent RNA helicase dbp7. (651 aa)
DSM5745_07429Uncharacterized protein. (170 aa)
DSM5745_07056Nucleolar protein 16. (232 aa)
DSM5745_07130WD_REPEATS_REGION domain-containing protein. (525 aa)
DSM5745_07342Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (431 aa)
DSM5745_07412ATP-dependent RNA helicase dbp3; Belongs to the DEAD box helicase family. (491 aa)
DSM5745_07343Exonuclease domain-containing protein. (299 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (785 aa)
DSM5745_06238Uncharacterized protein. (729 aa)
DSM5745_06382Uncharacterized protein. (693 aa)
DSM5745_06487Uncharacterized protein. (198 aa)
DSM5745_06396PUM-HD domain-containing protein. (707 aa)
DSM5745_06416CP-type G domain-containing protein. (543 aa)
DSM5745_06562Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
DSM5745_06403Uncharacterized protein. (124 aa)
DSM5745_06692Ribosomal_L18_c domain-containing protein. (301 aa)
DSM5745_06752ATP-dependent RNA helicase dbp9. (613 aa)
DSM5745_05472Uncharacterized protein. (1815 aa)
DSM5745_05615CP-type G domain-containing protein. (646 aa)
DSM5745_05324Uncharacterized protein. (383 aa)
DSM5745_05277Brix domain-containing protein. (331 aa)
DSM5745_04188Protein MAK16; Belongs to the MAK16 family. (321 aa)
DSM5745_04169KOW domain-containing protein. (149 aa)
DSM5745_0424760S ribosomal subunit assembly protein loc1. (189 aa)
DSM5745_04064Uncharacterized protein. (404 aa)
DSM5745_04294RAI1 domain-containing protein. (356 aa)
DSM5745_03346Uncharacterized protein. (109 aa)
DSM5745_03522RNA helicase. (639 aa)
DSM5745_03280Ribosome biogenesis protein nsa2. (332 aa)
DSM5745_01670Ribosomal_L7Ae domain-containing protein. (224 aa)
DSM5745_01864Uncharacterized protein. (804 aa)
DSM5745_01891Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (750 aa)
DSM5745_01996Uncharacterized protein. (764 aa)
DSM5745_02194Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4917 aa)
DSM5745_02356Putative 60S ribosomal protein L10. (221 aa)
DSM5745_02608Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (655 aa)
DSM5745_00209SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (791 aa)
DSM5745_00482Uncharacterized protein. (283 aa)
DSM5745_00604Brix domain-containing protein. (445 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (675 aa)
DSM5745_01497AB hydrolase-1 domain-containing protein. (330 aa)
DSM5745_01340Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (219 aa)
Your Current Organism:
Aspergillus mulundensis
NCBI taxonomy Id: 1810919
Other names: A. mulundensis, Aspergillus mulundensis Bills and Frisvad, 2015, Aspergillus sp. AJC-2016d, Aspergillus sp. QY-2015, Aspergillus sydowii var. GB-2015, Aspergillus sydowii var. mulundensis, CBS 140610, DSM 5745, DSMZ 5745, DTO 316-C9, IBT 33104
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