STRINGSTRING
DSM5745_07429 DSM5745_07429 DSM5745_07412 DSM5745_07412 DSM5745_06442 DSM5745_06442 DSM5745_06010 DSM5745_06010 DSM5745_04679 DSM5745_04679 DSM5745_05277 DSM5745_05277 DSM5745_04188 DSM5745_04188 DSM5745_04247 DSM5745_04247 DSM5745_03522 DSM5745_03522 DSM5745_03280 DSM5745_03280 DSM5745_01613 DSM5745_01613 DSM5745_01996 DSM5745_01996 DSM5745_00482 DSM5745_00482 DSM5745_01340 DSM5745_01340 DSM5745_09613 DSM5745_09613 SPB1 SPB1 DSM5745_11036 DSM5745_11036 DSM5745_08247 DSM5745_08247 DSM5745_08248 DSM5745_08248 DSM5745_07981 DSM5745_07981 DSM5745_08671 DSM5745_08671 DSM5745_08953 DSM5745_08953 DSM5745_07056 DSM5745_07056
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DSM5745_07429Uncharacterized protein. (170 aa)
DSM5745_07412ATP-dependent RNA helicase dbp3; Belongs to the DEAD box helicase family. (491 aa)
DSM5745_06442Putative CCAAT-box-binding transcription factor. (1096 aa)
DSM5745_06010Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (689 aa)
DSM5745_04679RNA helicase. (611 aa)
DSM5745_05277Brix domain-containing protein. (331 aa)
DSM5745_04188Protein MAK16; Belongs to the MAK16 family. (321 aa)
DSM5745_0424760S ribosomal subunit assembly protein loc1. (189 aa)
DSM5745_03522RNA helicase. (639 aa)
DSM5745_03280Ribosome biogenesis protein nsa2. (332 aa)
DSM5745_01613Uncharacterized protein. (861 aa)
DSM5745_01996Uncharacterized protein. (764 aa)
DSM5745_00482Uncharacterized protein. (283 aa)
DSM5745_01340Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (219 aa)
DSM5745_09613C2H2-type domain-containing protein. (112 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (813 aa)
DSM5745_11036RRM domain-containing protein. (447 aa)
DSM5745_08247Uncharacterized protein. (356 aa)
DSM5745_08248Brix domain-containing protein. (359 aa)
DSM5745_07981ATP-dependent RNA helicase DBP10. (936 aa)
DSM5745_0867160S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
DSM5745_08953Uncharacterized protein. (753 aa)
DSM5745_07056Nucleolar protein 16. (232 aa)
Your Current Organism:
Aspergillus mulundensis
NCBI taxonomy Id: 1810919
Other names: A. mulundensis, Aspergillus mulundensis Bills and Frisvad, 2015, Aspergillus sp. AJC-2016d, Aspergillus sp. QY-2015, Aspergillus sydowii var. GB-2015, Aspergillus sydowii var. mulundensis, CBS 140610, DSM 5745, DSMZ 5745, DTO 316-C9, IBT 33104
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