(13 nodes) Mixed, incl. FAD binding domain, and Y-form DNA binding network (fungal sp. No14919)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V1SQ86	Uncharacterized protein; Belongs to the cytochrome P450 family. (518 aa)
	A0A1V1SQP7	Uncharacterized protein; Belongs to the cytochrome P450 family. (526 aa)
	A0A1V1SX10	Ydc2-catalyt domain-containing protein. (373 aa)
	A0A1V1SXP3	FAD_binding_3 domain-containing protein. (442 aa)
	A0A1V1SY89	Uncharacterized protein; Belongs to the cytochrome P450 family. (533 aa)
	A0A1V1T083	Uncharacterized protein. (495 aa)
	A0A1V1T1Z5	VWFA domain-containing protein. (388 aa)
	A0A1V1TCE3	FAD_binding_3 domain-containing protein. (422 aa)
	A0A1V1TEL4	FAD_binding_3 domain-containing protein. (437 aa)
	A0A1V1TMF7	FAD_binding_3 domain-containing protein. (409 aa)
	A0A1V1TSZ3	FAD_binding_3 domain-containing protein. (423 aa)
	A0A1V1TUI2	Uncharacterized protein; Belongs to the cytochrome P450 family. (532 aa)
	A0A1V1TVK9	Uncharacterized protein. (482 aa)

Your Current Organism:

fungal sp. No14919

NCBI taxonomy Id: 1813822
Other names: f. sp. No.14919, fungal sp. No.14919

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V1SXP3	A0A1V1TEL4	FAD_binding_3 domain-containing protein.	FAD_binding_3 domain-containing protein.	0.409
A0A1V1SXP3	A0A1V1TSZ3	FAD_binding_3 domain-containing protein.	FAD_binding_3 domain-containing protein.	0.402
A0A1V1SXP3	A0A1V1TVK9	FAD_binding_3 domain-containing protein.	Uncharacterized protein.	0.472
A0A1V1TCE3	A0A1V1TVK9	FAD_binding_3 domain-containing protein.	Uncharacterized protein.	0.415
A0A1V1TEL4	A0A1V1SXP3	FAD_binding_3 domain-containing protein.	FAD_binding_3 domain-containing protein.	0.409
A0A1V1TEL4	A0A1V1TVK9	FAD_binding_3 domain-containing protein.	Uncharacterized protein.	0.408
A0A1V1TMF7	A0A1V1TSZ3	FAD_binding_3 domain-containing protein.	FAD_binding_3 domain-containing protein.	0.410
A0A1V1TSZ3	A0A1V1SXP3	FAD_binding_3 domain-containing protein.	FAD_binding_3 domain-containing protein.	0.402
A0A1V1TSZ3	A0A1V1TMF7	FAD_binding_3 domain-containing protein.	FAD_binding_3 domain-containing protein.	0.410
A0A1V1TVK9	A0A1V1SXP3	Uncharacterized protein.	FAD_binding_3 domain-containing protein.	0.472
A0A1V1TVK9	A0A1V1TCE3	Uncharacterized protein.	FAD_binding_3 domain-containing protein.	0.415
A0A1V1TVK9	A0A1V1TEL4	Uncharacterized protein.	FAD_binding_3 domain-containing protein.	0.408