(5 nodes) NAD kinase, and Alanine dehydrogenase/PNT, N-terminal domain network (fungal sp. No14919)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V1SV31	Uncharacterized protein. (1104 aa)
	A0A1V1SVV7	Uncharacterized protein. (591 aa)
	A0A1V1T586	Uncharacterized protein. (624 aa)
	A0A1V1TBS2	Uncharacterized protein. (473 aa)
	A0A1V1TQ23	Uncharacterized protein. (422 aa)

Your Current Organism:

fungal sp. No14919

NCBI taxonomy Id: 1813822
Other names: f. sp. No.14919, fungal sp. No.14919

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V1SV31	A0A1V1SVV7	Uncharacterized protein.	Uncharacterized protein.	0.706
A0A1V1SV31	A0A1V1T586	Uncharacterized protein.	Uncharacterized protein.	0.706
A0A1V1SV31	A0A1V1TBS2	Uncharacterized protein.	Uncharacterized protein.	0.685
A0A1V1SVV7	A0A1V1SV31	Uncharacterized protein.	Uncharacterized protein.	0.706
A0A1V1SVV7	A0A1V1TBS2	Uncharacterized protein.	Uncharacterized protein.	0.653
A0A1V1SVV7	A0A1V1TQ23	Uncharacterized protein.	Uncharacterized protein.	0.719
A0A1V1T586	A0A1V1SV31	Uncharacterized protein.	Uncharacterized protein.	0.706
A0A1V1T586	A0A1V1TBS2	Uncharacterized protein.	Uncharacterized protein.	0.655
A0A1V1T586	A0A1V1TQ23	Uncharacterized protein.	Uncharacterized protein.	0.719
A0A1V1TBS2	A0A1V1SV31	Uncharacterized protein.	Uncharacterized protein.	0.685
A0A1V1TBS2	A0A1V1SVV7	Uncharacterized protein.	Uncharacterized protein.	0.653
A0A1V1TBS2	A0A1V1T586	Uncharacterized protein.	Uncharacterized protein.	0.655
A0A1V1TBS2	A0A1V1TQ23	Uncharacterized protein.	Uncharacterized protein.	0.719
A0A1V1TQ23	A0A1V1SVV7	Uncharacterized protein.	Uncharacterized protein.	0.719
A0A1V1TQ23	A0A1V1T586	Uncharacterized protein.	Uncharacterized protein.	0.719
A0A1V1TQ23	A0A1V1TBS2	Uncharacterized protein.	Uncharacterized protein.	0.719