(5 nodes) rDNA heterochromatin, and Histone deacetylase network (fungal sp. No14919)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V1SSQ3	Hist_deacetyl domain-containing protein. (669 aa)
	A0A1V1ST57	HMG box domain-containing protein. (318 aa)
	A0A1V1SUP2	ENDO3c domain-containing protein. (578 aa)
	A0A1V1TCM2	Uncharacterized protein. (1643 aa)
	A0A1V1TG84	Uncharacterized protein. (1075 aa)

Your Current Organism:

fungal sp. No14919

NCBI taxonomy Id: 1813822
Other names: f. sp. No.14919, fungal sp. No.14919

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V1SSQ3	A0A1V1ST57	Hist_deacetyl domain-containing protein.	HMG box domain-containing protein.	0.631
A0A1V1SSQ3	A0A1V1SUP2	Hist_deacetyl domain-containing protein.	ENDO3c domain-containing protein.	0.928
A0A1V1SSQ3	A0A1V1TCM2	Hist_deacetyl domain-containing protein.	Uncharacterized protein.	0.950
A0A1V1SSQ3	A0A1V1TG84	Hist_deacetyl domain-containing protein.	Uncharacterized protein.	0.937
A0A1V1ST57	A0A1V1SSQ3	HMG box domain-containing protein.	Hist_deacetyl domain-containing protein.	0.631
A0A1V1ST57	A0A1V1SUP2	HMG box domain-containing protein.	ENDO3c domain-containing protein.	0.475
A0A1V1ST57	A0A1V1TCM2	HMG box domain-containing protein.	Uncharacterized protein.	0.678
A0A1V1ST57	A0A1V1TG84	HMG box domain-containing protein.	Uncharacterized protein.	0.733
A0A1V1SUP2	A0A1V1SSQ3	ENDO3c domain-containing protein.	Hist_deacetyl domain-containing protein.	0.928
A0A1V1SUP2	A0A1V1ST57	ENDO3c domain-containing protein.	HMG box domain-containing protein.	0.475
A0A1V1SUP2	A0A1V1TCM2	ENDO3c domain-containing protein.	Uncharacterized protein.	0.940
A0A1V1SUP2	A0A1V1TG84	ENDO3c domain-containing protein.	Uncharacterized protein.	0.524
A0A1V1TCM2	A0A1V1SSQ3	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.950
A0A1V1TCM2	A0A1V1ST57	Uncharacterized protein.	HMG box domain-containing protein.	0.678
A0A1V1TCM2	A0A1V1SUP2	Uncharacterized protein.	ENDO3c domain-containing protein.	0.940
A0A1V1TCM2	A0A1V1TG84	Uncharacterized protein.	Uncharacterized protein.	0.880
A0A1V1TG84	A0A1V1SSQ3	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.937
A0A1V1TG84	A0A1V1ST57	Uncharacterized protein.	HMG box domain-containing protein.	0.733
A0A1V1TG84	A0A1V1SUP2	Uncharacterized protein.	ENDO3c domain-containing protein.	0.524
A0A1V1TG84	A0A1V1TCM2	Uncharacterized protein.	Uncharacterized protein.	0.880