(6 nodes) RSC-type complex network (fungal sp. No14919)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V1TVT0	Uncharacterized protein. (1015 aa)
	A0A1V1SZ84	Uncharacterized protein. (961 aa)
	A0A1V1T6W1	Uncharacterized protein. (582 aa)
	A0A1V1TPJ3	Uncharacterized protein. (734 aa)
	A0A1V1TBJ1	Uncharacterized protein; Belongs to the actin family. (671 aa)
	A0A1V1STY2	Uncharacterized protein. (706 aa)

Your Current Organism:

fungal sp. No14919

NCBI taxonomy Id: 1813822
Other names: f. sp. No.14919, fungal sp. No.14919

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V1STY2	A0A1V1T6W1	Uncharacterized protein.	Uncharacterized protein.	0.481
A0A1V1SZ84	A0A1V1T6W1	Uncharacterized protein.	Uncharacterized protein.	0.815
A0A1V1SZ84	A0A1V1TBJ1	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.952
A0A1V1SZ84	A0A1V1TPJ3	Uncharacterized protein.	Uncharacterized protein.	0.888
A0A1V1SZ84	A0A1V1TVT0	Uncharacterized protein.	Uncharacterized protein.	0.861
A0A1V1T6W1	A0A1V1STY2	Uncharacterized protein.	Uncharacterized protein.	0.481
A0A1V1T6W1	A0A1V1SZ84	Uncharacterized protein.	Uncharacterized protein.	0.815
A0A1V1T6W1	A0A1V1TBJ1	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.809
A0A1V1T6W1	A0A1V1TPJ3	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A1V1T6W1	A0A1V1TVT0	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A1V1TBJ1	A0A1V1SZ84	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.952
A0A1V1TBJ1	A0A1V1T6W1	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.809
A0A1V1TBJ1	A0A1V1TPJ3	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.900
A0A1V1TBJ1	A0A1V1TVT0	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.900
A0A1V1TPJ3	A0A1V1SZ84	Uncharacterized protein.	Uncharacterized protein.	0.888
A0A1V1TPJ3	A0A1V1T6W1	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A1V1TPJ3	A0A1V1TBJ1	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.900
A0A1V1TVT0	A0A1V1SZ84	Uncharacterized protein.	Uncharacterized protein.	0.861
A0A1V1TVT0	A0A1V1T6W1	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A1V1TVT0	A0A1V1TBJ1	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.900