(8 nodes) GID complex network (fungal sp. No14919)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V1SQL6	IU_nuc_hydro domain-containing protein. (421 aa)
	A0A1V1SR63	Uncharacterized protein. (413 aa)
	A0A1V1SRS6	Uncharacterized protein. (86 aa)
	A0A1V1SVK4	Uncharacterized protein. (584 aa)
	A0A1V1T5Q4	Uncharacterized protein. (433 aa)
	A0A1V1TGV2	Uncharacterized protein. (356 aa)
	A0A1V1TMT1	Uncharacterized protein. (1023 aa)
	A0A1V1TRP5	IU_nuc_hydro domain-containing protein. (367 aa)

Your Current Organism:

fungal sp. No14919

NCBI taxonomy Id: 1813822
Other names: f. sp. No.14919, fungal sp. No.14919

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V1SR63	A0A1V1SVK4	Uncharacterized protein.	Uncharacterized protein.	0.796
A0A1V1SR63	A0A1V1T5Q4	Uncharacterized protein.	Uncharacterized protein.	0.957
A0A1V1SR63	A0A1V1TGV2	Uncharacterized protein.	Uncharacterized protein.	0.855
A0A1V1SVK4	A0A1V1SR63	Uncharacterized protein.	Uncharacterized protein.	0.796
A0A1V1SVK4	A0A1V1T5Q4	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A1V1SVK4	A0A1V1TGV2	Uncharacterized protein.	Uncharacterized protein.	0.805
A0A1V1T5Q4	A0A1V1SR63	Uncharacterized protein.	Uncharacterized protein.	0.957
A0A1V1T5Q4	A0A1V1SVK4	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A1V1T5Q4	A0A1V1TGV2	Uncharacterized protein.	Uncharacterized protein.	0.902
A0A1V1TGV2	A0A1V1SR63	Uncharacterized protein.	Uncharacterized protein.	0.855
A0A1V1TGV2	A0A1V1SVK4	Uncharacterized protein.	Uncharacterized protein.	0.805
A0A1V1TGV2	A0A1V1T5Q4	Uncharacterized protein.	Uncharacterized protein.	0.902