(8 nodes) Mitotic spindle pole body network (fungal sp. No14919)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V1SV17	Uncharacterized protein. (306 aa)
	A0A1V1SWG9	Uncharacterized protein. (933 aa)
	A0A1V1T4E9	Uncharacterized protein. (1818 aa)
	A0A1V1THG5	J domain-containing protein. (831 aa)
	A0A1V1SWH4	Uncharacterized protein. (303 aa)
	A0A1V1TJG8	Uncharacterized protein. (703 aa)
	A0A1V1TMQ7	Uncharacterized protein. (375 aa)
	A0A1V1TVK7	Uncharacterized protein. (587 aa)

Your Current Organism:

fungal sp. No14919

NCBI taxonomy Id: 1813822
Other names: f. sp. No.14919, fungal sp. No.14919

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V1SV17	A0A1V1SWH4	Uncharacterized protein.	Uncharacterized protein.	0.638
A0A1V1SV17	A0A1V1T4E9	Uncharacterized protein.	Uncharacterized protein.	0.939
A0A1V1SV17	A0A1V1TVK7	Uncharacterized protein.	Uncharacterized protein.	0.483
A0A1V1SWH4	A0A1V1SV17	Uncharacterized protein.	Uncharacterized protein.	0.638
A0A1V1SWH4	A0A1V1T4E9	Uncharacterized protein.	Uncharacterized protein.	0.559
A0A1V1T4E9	A0A1V1SV17	Uncharacterized protein.	Uncharacterized protein.	0.939
A0A1V1T4E9	A0A1V1SWH4	Uncharacterized protein.	Uncharacterized protein.	0.559
A0A1V1T4E9	A0A1V1TMQ7	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A1V1T4E9	A0A1V1TVK7	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A1V1TMQ7	A0A1V1T4E9	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A1V1TVK7	A0A1V1SV17	Uncharacterized protein.	Uncharacterized protein.	0.483
A0A1V1TVK7	A0A1V1T4E9	Uncharacterized protein.	Uncharacterized protein.	0.540