(19 nodes) Ribosomal protein S5 domain 2-type fold, subgroup network (fungal sp. No14919)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V1SQ37	DNA_mis_repair domain-containing protein. (725 aa)
	A0A1V1SQ42	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (935 aa)
	A0A1V1SQW6	Uncharacterized protein. (1052 aa)
	A0A1V1SS76	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (262 aa)
	MEF1	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (799 aa)
	A0A1V1STA8	Tr-type G domain-containing protein. (987 aa)
	PIM1	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (1104 aa)
	A0A1V1SVJ6	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (312 aa)
	A0A1V1SXD2	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (431 aa)
	A0A1V1T0L0	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1695 aa)
	A0A1V1T0X8	Phosphomevalonate kinase; Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (444 aa)
	A0A1V1T120	DNA_mis_repair domain-containing protein. (917 aa)
	A0A1V1T503	Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. (381 aa)
	A0A1V1T6R6	Tr-type G domain-containing protein. (844 aa)
	A0A1V1T7Z9	Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (515 aa)
	A0A1V1TBH9	Uncharacterized protein. (516 aa)
	A0A1V1TNT5	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	A0A1V1TTN6	Uncharacterized protein. (354 aa)
	A0A1V1TU67	Tr-type G domain-containing protein. (1066 aa)

Your Current Organism:

fungal sp. No14919

NCBI taxonomy Id: 1813822
Other names: f. sp. No.14919, fungal sp. No.14919

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1V1SQ37	A0A1V1SQW6	A0A1V1SQ37	A0A1V1SQW6	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.999
A0A1V1SQ37	A0A1V1T120	A0A1V1SQ37	A0A1V1T120	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.991
A0A1V1SQW6	A0A1V1SQ37	A0A1V1SQW6	A0A1V1SQ37	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.999
A0A1V1SQW6	A0A1V1T120	A0A1V1SQW6	A0A1V1T120	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.820
A0A1V1SS76	A0A1V1STA8	A0A1V1SS76	A0A1V1STA8	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Tr-type G domain-containing protein.	0.880
A0A1V1SS76	A0A1V1SVJ6	A0A1V1SS76	A0A1V1SVJ6	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.996
A0A1V1SS76	A0A1V1SXD2	A0A1V1SS76	A0A1V1SXD2	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.828
A0A1V1SS76	A0A1V1T6R6	A0A1V1SS76	A0A1V1T6R6	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Tr-type G domain-containing protein.	0.999
A0A1V1SS76	A0A1V1TNT5	A0A1V1SS76	A0A1V1TNT5	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
A0A1V1SS76	A0A1V1TU67	A0A1V1SS76	A0A1V1TU67	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Tr-type G domain-containing protein.	0.880
A0A1V1SS76	MEF1	A0A1V1SS76	A0A1V1ST99	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.943
A0A1V1STA8	A0A1V1SS76	A0A1V1STA8	A0A1V1SS76	Tr-type G domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.880
A0A1V1STA8	A0A1V1SVJ6	A0A1V1STA8	A0A1V1SVJ6	Tr-type G domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.946
A0A1V1STA8	A0A1V1SXD2	A0A1V1STA8	A0A1V1SXD2	Tr-type G domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.880
A0A1V1STA8	A0A1V1TNT5	A0A1V1STA8	A0A1V1TNT5	Tr-type G domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.851
A0A1V1SVJ6	A0A1V1SS76	A0A1V1SVJ6	A0A1V1SS76	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.996
A0A1V1SVJ6	A0A1V1STA8	A0A1V1SVJ6	A0A1V1STA8	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Tr-type G domain-containing protein.	0.946
A0A1V1SVJ6	A0A1V1SXD2	A0A1V1SVJ6	A0A1V1SXD2	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
A0A1V1SVJ6	A0A1V1T0L0	A0A1V1SVJ6	A0A1V1T0L0	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.420
A0A1V1SVJ6	A0A1V1T6R6	A0A1V1SVJ6	A0A1V1T6R6	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Tr-type G domain-containing protein.	0.946