(38 nodes) Ribonuclease H superfamily network (fungal sp. No14919)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V1SQB5	Uncharacterized protein. (244 aa)
	A0A1V1SR51	Uncharacterized protein. (492 aa)
	A0A1V1SRU0	HRDC domain-containing protein. (820 aa)
	A0A1V1ST02	RNase H domain-containing protein. (244 aa)
	A0A1V1STM8	RNase H domain-containing protein. (150 aa)
	A0A1V1SVC7	3'-5' exonuclease domain-containing protein. (560 aa)
	A0A1V1SW11	Uncharacterized protein. (622 aa)
	A0A1V1SWA5	Uncharacterized protein. (992 aa)
	A0A1V1SX10	Ydc2-catalyt domain-containing protein. (373 aa)
	A0A1V1SXJ0	Uncharacterized protein; Belongs to the argonaute family. (1012 aa)
	A0A1V1SXS2	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2275 aa)
	A0A1V1SYA4	HRDC domain-containing protein. (825 aa)
	A0A1V1SZN7	RNase H domain-containing protein. (278 aa)
	A0A1V1T077	Uncharacterized protein. (1093 aa)
	A0A1V1T0R8	Exonuclease domain-containing protein. (399 aa)
	A0A1V1T0W2	RNase H domain-containing protein. (365 aa)
	A0A1V1T5R3	3'-5' exonuclease domain-containing protein. (361 aa)
	A0A1V1T5X9	Integrase catalytic domain-containing protein. (1177 aa)
	A0A1V1T6A9	RNase H domain-containing protein. (258 aa)
	A0A1V1T6Q5	Exonuclease domain-containing protein. (191 aa)
	A0A1V1T872	DNA polymerase. (1104 aa)
	A0A1V1T8R5	Exonuclease domain-containing protein. (676 aa)
	A0A1V1TA69	C2H2-type domain-containing protein. (406 aa)
	A0A1V1TBX9	Exonuclease domain-containing protein. (365 aa)
	A0A1V1TEJ1	RNase H domain-containing protein. (298 aa)
	A0A1V1TGH9	Exonuclease domain-containing protein. (711 aa)
	A0A1V1TJH2	RNase H domain-containing protein. (361 aa)
	A0A1V1TLK1	DNA polymerase. (1484 aa)
	A0A1V1TMH9	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (347 aa)
	A0A1V1TMV3	Uncharacterized protein. (539 aa)
	A0A1V1TMZ7	Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (326 aa)
	A0A1V1TNT2	DNA polymerase. (1718 aa)
	A0A1V1TNU5	Uncharacterized protein. (1898 aa)
	A0A1V1TRC6	C2H2-type domain-containing protein. (431 aa)
	PAN2	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1184 aa)
	A0A1V1TT32	RNase H domain-containing protein. (653 aa)
	A0A1V1TVL6	RNase H domain-containing protein. (164 aa)
	A0A1V1TW17	Uncharacterized protein. (265 aa)

Your Current Organism:

fungal sp. No14919

NCBI taxonomy Id: 1813822
Other names: f. sp. No.14919, fungal sp. No.14919

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1V1SR51	A0A1V1SW11	A0A1V1SR51	A0A1V1SW11	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A1V1SR51	A0A1V1SWA5	A0A1V1SR51	A0A1V1SWA5	Uncharacterized protein.	Uncharacterized protein.	0.404
A0A1V1SR51	A0A1V1SXJ0	A0A1V1SR51	A0A1V1SXJ0	Uncharacterized protein.	Uncharacterized protein; Belongs to the argonaute family.	0.404
A0A1V1SR51	A0A1V1T077	A0A1V1SR51	A0A1V1T077	Uncharacterized protein.	Uncharacterized protein.	0.404
A0A1V1SR51	A0A1V1TLK1	A0A1V1SR51	A0A1V1TLK1	Uncharacterized protein.	DNA polymerase.	0.638
A0A1V1SR51	PAN2	A0A1V1SR51	A0A1V1TRG1	Uncharacterized protein.	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	0.532
A0A1V1SRU0	A0A1V1SVC7	A0A1V1SRU0	A0A1V1SVC7	HRDC domain-containing protein.	3'-5' exonuclease domain-containing protein.	0.961
A0A1V1SRU0	A0A1V1SX10	A0A1V1SRU0	A0A1V1SX10	HRDC domain-containing protein.	Ydc2-catalyt domain-containing protein.	0.451
A0A1V1SRU0	A0A1V1SXS2	A0A1V1SRU0	A0A1V1SXS2	HRDC domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.983
A0A1V1SRU0	A0A1V1SYA4	A0A1V1SRU0	A0A1V1SYA4	HRDC domain-containing protein.	HRDC domain-containing protein.	0.658
A0A1V1SRU0	A0A1V1T872	A0A1V1SRU0	A0A1V1T872	HRDC domain-containing protein.	DNA polymerase.	0.908
A0A1V1SRU0	A0A1V1TLK1	A0A1V1SRU0	A0A1V1TLK1	HRDC domain-containing protein.	DNA polymerase.	0.859
A0A1V1SRU0	A0A1V1TMH9	A0A1V1SRU0	A0A1V1TMH9	HRDC domain-containing protein.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.697
A0A1V1SRU0	A0A1V1TNT2	A0A1V1SRU0	A0A1V1TNT2	HRDC domain-containing protein.	DNA polymerase.	0.818
A0A1V1ST02	A0A1V1TMH9	A0A1V1ST02	A0A1V1TMH9	RNase H domain-containing protein.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.648
A0A1V1STM8	A0A1V1TMH9	A0A1V1STM8	A0A1V1TMH9	RNase H domain-containing protein.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.626
A0A1V1SVC7	A0A1V1SRU0	A0A1V1SVC7	A0A1V1SRU0	3'-5' exonuclease domain-containing protein.	HRDC domain-containing protein.	0.961
A0A1V1SVC7	A0A1V1SX10	A0A1V1SVC7	A0A1V1SX10	3'-5' exonuclease domain-containing protein.	Ydc2-catalyt domain-containing protein.	0.451
A0A1V1SVC7	A0A1V1SXS2	A0A1V1SVC7	A0A1V1SXS2	3'-5' exonuclease domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.983
A0A1V1SVC7	A0A1V1SYA4	A0A1V1SVC7	A0A1V1SYA4	3'-5' exonuclease domain-containing protein.	HRDC domain-containing protein.	0.658