(28 nodes) AMP-binding enzyme network (Panaeolus cyanescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CVT24_007668	Uncharacterized protein. (569 aa)
	CVT24_007305	Uncharacterized protein. (634 aa)
	CVT24_011994	Uncharacterized protein. (575 aa)
	CVT24_006720	AMP-binding domain-containing protein. (582 aa)
	CVT24_008209	Uncharacterized protein. (612 aa)
	CVT24_003025	Acetyl-coenzyme A synthetase. (660 aa)
	CVT24_009492	Uncharacterized protein. (620 aa)
	CVT24_004773	Uncharacterized protein. (1702 aa)
	CVT24_009377	AMP-binding domain-containing protein. (704 aa)
	CVT24_010978	AMP-binding domain-containing protein. (707 aa)
	CVT24_011277	AMP-binding domain-containing protein. (1027 aa)
	CVT24_010381	Carrier domain-containing protein. (1136 aa)
	CVT24_007726	Uncharacterized protein. (2403 aa)
	CVT24_012436	Uncharacterized protein. (582 aa)
	CVT24_006361	AMP-binding domain-containing protein. (707 aa)
	CVT24_004589	AMP-binding domain-containing protein. (527 aa)
	CVT24_009617	Uncharacterized protein. (2460 aa)
	CVT24_003346	Uncharacterized protein. (652 aa)
	CVT24_003949	Uncharacterized protein. (1137 aa)
	CVT24_003999	Uncharacterized protein. (704 aa)
	CVT24_002582	Uncharacterized protein. (1090 aa)
	CVT24_012261	Carrier domain-containing protein. (1433 aa)
	CVT24_008585	Uncharacterized protein. (578 aa)
	CVT24_001055	Uncharacterized protein. (1647 aa)
	CVT24_001199	AMP-binding domain-containing protein. (633 aa)
	CVT24_001361	AMP-binding domain-containing protein. (1030 aa)
	CVT24_001670	Uncharacterized protein. (572 aa)
	CVT24_011544	Uncharacterized protein. (584 aa)

Your Current Organism:

Panaeolus cyanescens

NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT24_001055	CVT24_001199	A0A409VX69	A0A409VU51	Uncharacterized protein.	AMP-binding domain-containing protein.	0.455
CVT24_001055	CVT24_001361	A0A409VX69	A0A409VTK2	Uncharacterized protein.	AMP-binding domain-containing protein.	0.616
CVT24_001055	CVT24_002582	A0A409VX69	A0A409WB61	Uncharacterized protein.	Uncharacterized protein.	0.616
CVT24_001055	CVT24_003025	A0A409VX69	A0A409VFP4	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.646
CVT24_001055	CVT24_003346	A0A409VX69	A0A409Y760	Uncharacterized protein.	Uncharacterized protein.	0.646
CVT24_001055	CVT24_003999	A0A409VX69	A0A409Y6D6	Uncharacterized protein.	Uncharacterized protein.	0.646
CVT24_001055	CVT24_006361	A0A409VX69	A0A409YE42	Uncharacterized protein.	AMP-binding domain-containing protein.	0.455
CVT24_001055	CVT24_006720	A0A409VX69	A0A409VEE0	Uncharacterized protein.	AMP-binding domain-containing protein.	0.456
CVT24_001055	CVT24_007726	A0A409VX69	A0A409YKP1	Uncharacterized protein.	Uncharacterized protein.	0.656
CVT24_001055	CVT24_009377	A0A409VX69	A0A409VAR9	Uncharacterized protein.	AMP-binding domain-containing protein.	0.478
CVT24_001055	CVT24_009617	A0A409VX69	A0A409YA00	Uncharacterized protein.	Uncharacterized protein.	0.498
CVT24_001055	CVT24_010381	A0A409VX69	A0A409YQ35	Uncharacterized protein.	Carrier domain-containing protein.	0.616
CVT24_001055	CVT24_010978	A0A409VX69	A0A409YVM4	Uncharacterized protein.	AMP-binding domain-containing protein.	0.455
CVT24_001055	CVT24_011277	A0A409VX69	A0A409YUR8	Uncharacterized protein.	AMP-binding domain-containing protein.	0.616
CVT24_001055	CVT24_012261	A0A409VX69	A0A409W5Q5	Uncharacterized protein.	Carrier domain-containing protein.	0.616
CVT24_001199	CVT24_001055	A0A409VU51	A0A409VX69	AMP-binding domain-containing protein.	Uncharacterized protein.	0.455
CVT24_001199	CVT24_001670	A0A409VU51	A0A409VSR2	AMP-binding domain-containing protein.	Uncharacterized protein.	0.526
CVT24_001199	CVT24_003949	A0A409VU51	A0A409Y6F4	AMP-binding domain-containing protein.	Uncharacterized protein.	0.518
CVT24_001199	CVT24_004589	A0A409VU51	A0A409YBE2	AMP-binding domain-containing protein.	AMP-binding domain-containing protein.	0.455
CVT24_001199	CVT24_006720	A0A409VU51	A0A409VEE0	AMP-binding domain-containing protein.	AMP-binding domain-containing protein.	0.844