STRINGSTRING
ANU52756.1 ANU52756.1 ANU52897.1 ANU52897.1 A4V00_02075 A4V00_02075 ANU52993.2 ANU52993.2 ANU53256.1 ANU53256.1 ANU53355.1 ANU53355.1 ANU53383.1 ANU53383.1 ANU53384.1 ANU53384.1 ANU53385.1 ANU53385.1 ANU53386.2 ANU53386.2 ANU53387.1 ANU53387.1 ANU56032.1 ANU56032.1 ANU53978.1 ANU53978.1 ARE60644.1 ARE60644.1 A4V00_11850 A4V00_11850 ANU54644.1 ANU54644.1 ANU54834.2 ANU54834.2 ANU55034.1 ANU55034.1 ANU55175.1 ANU55175.1 ARE60674.1 ARE60674.1 ANU55176.1 ANU55176.1 ANU55177.1 ANU55177.1 ANU55178.1 ANU55178.1 ANU56107.2 ANU56107.2 cheB cheB ANU55180.1 ANU55180.1 ANU55181.2 ANU55181.2 ANU55182.1 ANU55182.1 ANU55183.1 ANU55183.1 ANU55184.1 ANU55184.1 fliW fliW csrA csrA ANU55187.1 ANU55187.1 ANU55190.2 ANU55190.2 ANU55191.1 ANU55191.1 ANU55195.1 ANU55195.1 ANU55198.1 ANU55198.1 ANU55199.1 ANU55199.1 fliE fliE ANU55201.1 ANU55201.1 ANU56108.2 ANU56108.2 ANU55202.1 ANU55202.1 ANU55203.1 ANU55203.1 ANU55204.1 ANU55204.1 ANU55205.1 ANU55205.1 ANU55206.1 ANU55206.1 ANU55207.2 ANU55207.2 ANU55208.1 ANU55208.1 ARE60675.1 ARE60675.1 ANU55209.1 ANU55209.1 ANU55210.1 ANU55210.1 ANU55211.1 ANU55211.1 ANU55212.1 ANU55212.1 ANU55213.1 ANU55213.1 ANU55214.1 ANU55214.1 fliP fliP fliQ fliQ ANU55216.1 ANU55216.1 flhB flhB flhA flhA ANU55219.1 ANU55219.1 ANU55220.1 ANU55220.1 ANU55221.1 ANU55221.1 ANU56110.1 ANU56110.1 cheD cheD ANU55223.2 ANU55223.2 ANU55224.1 ANU55224.1 ANU55243.1 ANU55243.1 ANU55318.1 ANU55318.1 ANU56115.1 ANU56115.1 A4V00_17050 A4V00_17050 ANU55862.1 ANU55862.1 ANU55898.1 ANU55898.1 ANU55900.1 ANU55900.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ANU52756.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
ANU52897.1TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
A4V00_02075Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
ANU52993.2Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (615 aa)
ANU53256.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa)
ANU53355.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)
ANU53383.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
ANU53384.1Formate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)
ANU53385.1MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)
ANU53386.2Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
ANU53387.1PilZ domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
ANU56032.1Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (654 aa)
ANU53978.1Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (287 aa)
ARE60644.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
A4V00_11850Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
ANU54644.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (65 aa)
ANU54834.2Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (155 aa)
ANU55034.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (528 aa)
ANU55175.1PilZ domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
ARE60674.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
ANU55176.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (474 aa)
ANU55177.1Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. (692 aa)
ANU55178.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
ANU56107.2Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
cheBChemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (348 aa)
ANU55180.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)
ANU55181.2Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
ANU55182.1Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. (602 aa)
ANU55183.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (367 aa)
ANU55184.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
fliWFlagellar assembly protein FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. (150 aa)
csrACarbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (82 aa)
ANU55187.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
ANU55190.2Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (812 aa)
ANU55191.1Flagellar protein FliS; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
ANU55195.1Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa)
ANU55198.1Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (129 aa)
ANU55199.1Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. (154 aa)
fliEHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (99 aa)
ANU55201.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (541 aa)
ANU56108.2Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
ANU55202.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
ANU55203.1Flagellar protein export ATPase FliI; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
ANU55204.1Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
ANU55205.1Flagellar hook-length control protein FliK; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
ANU55206.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
ANU55207.2Flagellar biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)
ANU55208.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
ARE60675.1Flagellar protein FlbD; Derived by automated computational analysis using gene prediction method: Protein Homology. (89 aa)
ANU55209.1Motility protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
ANU55210.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
ANU55211.1Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
ANU55212.1Flagellar motor switch protein FliN; Derived by automated computational analysis using gene prediction method: Protein Homology. (450 aa)
ANU55213.1Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
ANU55214.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (220 aa)
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (83 aa)
ANU55216.1Flagellar biosynthesis protein FliR; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
flhBFlagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (358 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (698 aa)
ANU55219.1FliA/WhiG family RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. (259 aa)
ANU55220.1Flagellar hook-basal body protein FlhO; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
ANU55221.1Flagellar biosynthesis protein FlgG; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
ANU56110.1Chemotaxis protein CheC; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
cheDChemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (162 aa)
ANU55223.2Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
ANU55224.1Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)
ANU55243.1Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)
ANU55318.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (80 aa)
ANU56115.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
A4V00_17050DNA invertase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)
ANU55862.1TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
ANU55898.1RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
ANU55900.1TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
Your Current Organism:
Hungateiclostridiaceae bacterium KB18
NCBI taxonomy Id: 1834198
Other names: H. bacterium KB18, Ruminiclostridium sp. KB18
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