(11 nodes) Bacterial chemotaxis network (Hungateiclostridiaceae bacterium KB18)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANU56032.1	Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (654 aa)
	ANU55177.1	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. (692 aa)
	ANU55178.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
	ANU56107.2	Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	cheB	Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (348 aa)
	ANU55195.1	Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa)
	ANU55213.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
	ANU56110.1	Chemotaxis protein CheC; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
	cheD	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (162 aa)
	ANU55223.2	Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	ANU55243.1	Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)

Your Current Organism:

Hungateiclostridiaceae bacterium KB18

NCBI taxonomy Id: 1834198
Other names: H. bacterium KB18, Ruminiclostridium sp. KB18

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANU55177.1	ANU55178.1	A4V00_14795	A4V00_14800	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANU55177.1	ANU55195.1	A4V00_14795	A4V00_14890	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
ANU55177.1	ANU55213.1	A4V00_14795	A4V00_14990	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
ANU55177.1	ANU55223.2	A4V00_14795	A4V00_15050	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANU55177.1	ANU55243.1	A4V00_14795	A4V00_15155	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
ANU55177.1	ANU56032.1	A4V00_14795	A4V00_08020	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
ANU55177.1	ANU56107.2	A4V00_14795	A4V00_14805	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
ANU55177.1	ANU56110.1	A4V00_14795	A4V00_15040	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
ANU55177.1	cheB	A4V00_14795	A4V00_14810	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.	0.999
ANU55177.1	cheD	A4V00_14795	A4V00_15045	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.	0.966
ANU55178.1	ANU55177.1	A4V00_14800	A4V00_14795	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANU55178.1	ANU55195.1	A4V00_14800	A4V00_14890	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
ANU55178.1	ANU55213.1	A4V00_14800	A4V00_14990	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
ANU55178.1	ANU55223.2	A4V00_14800	A4V00_15050	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
ANU55178.1	ANU55243.1	A4V00_14800	A4V00_15155	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
ANU55178.1	ANU56032.1	A4V00_14800	A4V00_08020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
ANU55178.1	ANU56107.2	A4V00_14800	A4V00_14805	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
ANU55178.1	ANU56110.1	A4V00_14800	A4V00_15040	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.896
ANU55178.1	cheB	A4V00_14800	A4V00_14810	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.	0.999
ANU55178.1	cheD	A4V00_14800	A4V00_15045	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.	0.943