(6 nodes) Transposon-encoded protein TnpV, and RNA polymerase sigma-70 region 4 network (Hungateiclostridiaceae bacterium KB18)

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANU52756.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
	ANU52897.1	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
	A4V00_02075	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
	ANU55862.1	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
	ANU55898.1	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
	ANU55900.1	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)

Your Current Organism:

Hungateiclostridiaceae bacterium KB18

NCBI taxonomy Id: 1834198
Other names: H. bacterium KB18, Ruminiclostridium sp. KB18

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A4V00_02075	ANU52897.1	A4V00_02075	A4V00_02050	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
A4V00_02075	ANU55862.1	A4V00_02075	A4V00_18640	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
A4V00_02075	ANU55900.1	A4V00_02075	A4V00_18840	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.763
ANU52756.1	ANU52897.1	A4V00_01255	A4V00_02050	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
ANU52756.1	ANU55862.1	A4V00_01255	A4V00_18640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
ANU52756.1	ANU55900.1	A4V00_01255	A4V00_18840	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.745
ANU52897.1	A4V00_02075	A4V00_02050	A4V00_02075	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
ANU52897.1	ANU52756.1	A4V00_02050	A4V00_01255	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
ANU52897.1	ANU55898.1	A4V00_02050	A4V00_18825	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
ANU55862.1	A4V00_02075	A4V00_18640	A4V00_02075	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
ANU55862.1	ANU52756.1	A4V00_18640	A4V00_01255	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
ANU55862.1	ANU55898.1	A4V00_18640	A4V00_18825	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
ANU55898.1	ANU52897.1	A4V00_18825	A4V00_02050	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology.	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
ANU55898.1	ANU55862.1	A4V00_18825	A4V00_18640	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology.	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
ANU55898.1	ANU55900.1	A4V00_18825	A4V00_18840	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology.	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
ANU55900.1	A4V00_02075	A4V00_18840	A4V00_02075	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.763
ANU55900.1	ANU52756.1	A4V00_18840	A4V00_01255	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.745
ANU55900.1	ANU55898.1	A4V00_18840	A4V00_18825	TnpV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762