(29 nodes) Inositol metabolic process, and Xylose isomerase-like, TIM barrel domain network (Hungateiclostridiaceae bacterium KB18)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANU52591.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (278 aa)
	ANU52649.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
	ANU52651.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	ANU52659.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
	ANU53281.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
	ANU53282.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
	ANU53283.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
	ANU53284.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
	ANU53290.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
	ANU53352.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
	ANU53353.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
	ANU53775.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
	ANU56019.1	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
	ANU54315.2	Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
	ANU54430.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
	ANU54433.1	Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	ANU54434.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
	ANU54630.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
	ANU54633.1	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
	ANU54662.1	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
	ANU55147.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)
	ANU55148.1	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
	ANU55240.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)
	ANU55241.1	Zn-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
	ANU55242.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
	ANU56121.2	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
	ANU55682.1	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
	ANU55683.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
	ANU55688.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)

Your Current Organism:

Hungateiclostridiaceae bacterium KB18

NCBI taxonomy Id: 1834198
Other names: H. bacterium KB18, Ruminiclostridium sp. KB18

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANU52591.1	ANU52649.1	A4V00_00335	A4V00_00675	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.707
ANU52591.1	ANU53282.1	A4V00_00335	A4V00_04130	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
ANU52591.1	ANU53353.1	A4V00_00335	A4V00_04510	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.426
ANU52591.1	ANU53775.1	A4V00_00335	A4V00_06875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
ANU52591.1	ANU54315.2	A4V00_00335	A4V00_09935	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.413
ANU52591.1	ANU54434.1	A4V00_00335	A4V00_10635	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.633
ANU52591.1	ANU54633.1	A4V00_00335	A4V00_11790	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.516
ANU52591.1	ANU55148.1	A4V00_00335	A4V00_14635	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
ANU52591.1	ANU55683.1	A4V00_00335	A4V00_17615	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.462
ANU52649.1	ANU52591.1	A4V00_00675	A4V00_00335	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.707
ANU52649.1	ANU52659.1	A4V00_00675	A4V00_00725	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.484
ANU52649.1	ANU53281.1	A4V00_00675	A4V00_04125	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
ANU52649.1	ANU53283.1	A4V00_00675	A4V00_04135	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.466
ANU52649.1	ANU53352.1	A4V00_00675	A4V00_04505	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.505
ANU52649.1	ANU53353.1	A4V00_00675	A4V00_04510	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.595
ANU52649.1	ANU53775.1	A4V00_00675	A4V00_06875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.694
ANU52649.1	ANU54315.2	A4V00_00675	A4V00_09935	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.641
ANU52649.1	ANU54430.1	A4V00_00675	A4V00_10615	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.407
ANU52649.1	ANU54434.1	A4V00_00675	A4V00_10635	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.535
ANU52649.1	ANU54633.1	A4V00_00675	A4V00_11790	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567