STRINGSTRING
A0A1F5L5M6 A0A1F5L5M6 A0A1F5L6H1 A0A1F5L6H1 A0A1F5L701 A0A1F5L701 A0A1F5L892 A0A1F5L892 A0A1F5LA94 A0A1F5LA94 A0A1F5LAA1 A0A1F5LAA1 A0A1F5LAX5 A0A1F5LAX5 A0A1F5LDA4 A0A1F5LDA4 A0A1F5LDX1 A0A1F5LDX1 A0A1F5LEG9 A0A1F5LEG9 A0A1F5LEZ0 A0A1F5LEZ0 A0A1F5LFL6 A0A1F5LFL6 A0A1F5LFP5 A0A1F5LFP5 A0A1F5LFZ6 A0A1F5LFZ6 A0A1F5LGX9 A0A1F5LGX9 LSM5 LSM5 A0A1F5LI73 A0A1F5LI73 A0A1F5LIN6 A0A1F5LIN6 A0A1F5LJG9 A0A1F5LJG9 A0A1F5LLH0 A0A1F5LLH0 A0A1F5LLS8 A0A1F5LLS8 A0A1F5LM12 A0A1F5LM12 A0A1F5LMR9 A0A1F5LMR9 A0A1F5LNI8 A0A1F5LNI8 A0A1F5LRN0 A0A1F5LRN0 A0A1F5LRN7 A0A1F5LRN7 A0A1F5LRW6 A0A1F5LRW6 A0A1F5LSG8 A0A1F5LSG8 A0A1F5LTJ2 A0A1F5LTJ2 A0A1F5LTQ0 A0A1F5LTQ0 A0A1F5LTQ7 A0A1F5LTQ7 LSM8 LSM8 A0A1F5LUA5 A0A1F5LUA5 A0A1F5LW85 A0A1F5LW85 A0A1F5LWU4 A0A1F5LWU4 A0A1F5LXA6 A0A1F5LXA6 A0A1F5LXA9 A0A1F5LXA9 LSM3 LSM3 A0A1F5LYA1 A0A1F5LYA1 A0A1F5LZ28 A0A1F5LZ28 A0A1F5LZE6 A0A1F5LZE6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1F5L5M6Matrin-type domain-containing protein. (235 aa)
A0A1F5L6H1Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (122 aa)
A0A1F5L701Sm domain-containing protein. (79 aa)
A0A1F5L892Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (87 aa)
A0A1F5LA94WD_REPEATS_REGION domain-containing protein. (359 aa)
A0A1F5LAA1Uncharacterized protein. (260 aa)
A0A1F5LAX5SF3b1 domain-containing protein. (1225 aa)
A0A1F5LDA4Uncharacterized protein. (383 aa)
A0A1F5LDX1Uncharacterized protein. (667 aa)
A0A1F5LEG9Small nuclear ribonucleoprotein Sm D3. (116 aa)
A0A1F5LEZ0PSP domain-containing protein. (556 aa)
A0A1F5LFL6CPSF_A domain-containing protein. (1254 aa)
A0A1F5LFP5RRM domain-containing protein. (139 aa)
A0A1F5LFZ6Uncharacterized protein. (937 aa)
A0A1F5LGX9Sm domain-containing protein. (242 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (117 aa)
A0A1F5LI73Nuclear cap-binding protein subunit 2. (175 aa)
A0A1F5LIN6Uncharacterized protein. (249 aa)
A0A1F5LJG9Small nuclear ribonucleoprotein Sm D2. (117 aa)
A0A1F5LLH0Small nuclear ribonucleoprotein G. (78 aa)
A0A1F5LLS8Uncharacterized protein. (2203 aa)
A0A1F5LM12Uncharacterized protein. (516 aa)
A0A1F5LMR9WD_REPEATS_REGION domain-containing protein. (518 aa)
A0A1F5LNI8Uncharacterized protein. (579 aa)
A0A1F5LRN0U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (704 aa)
A0A1F5LRN7Uncharacterized protein. (108 aa)
A0A1F5LRW6CPSF_A domain-containing protein. (1209 aa)
A0A1F5LSG8Uncharacterized protein. (1176 aa)
A0A1F5LTJ2Uncharacterized protein. (348 aa)
A0A1F5LTQ0Nop domain-containing protein. (513 aa)
A0A1F5LTQ7Uncharacterized protein. (819 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A0A1F5LUA5Tr-type G domain-containing protein. (983 aa)
A0A1F5LW85Matrin-type domain-containing protein. (501 aa)
A0A1F5LWU4RRM domain-containing protein. (409 aa)
A0A1F5LXA6Uncharacterized protein; Belongs to the DEAD box helicase family. (800 aa)
A0A1F5LXA9Splicing factor subunit; Belongs to the SF3B5 family. (84 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
A0A1F5LYA1Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
A0A1F5LZ28Uncharacterized protein. (249 aa)
A0A1F5LZE6JAB_MPN domain-containing protein. (2354 aa)
Your Current Organism:
Penicillium arizonense
NCBI taxonomy Id: 1835702
Other names: CBS 141311, Herb. C-F-101845, IBT 12289, P. arizonense, Penicillium arizonense Frisvad, Grijseels and J.C. Nielsen, 2016, Penicillium sp. JCN-2016
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