STRINGSTRING
A0A1F5L701 A0A1F5L701 A0A1F5LA94 A0A1F5LA94 A0A1F5LAA1 A0A1F5LAA1 A0A1F5LDA4 A0A1F5LDA4 A0A1F5LDX1 A0A1F5LDX1 A0A1F5LFZ6 A0A1F5LFZ6 LSM5 LSM5 A0A1F5LJG9 A0A1F5LJG9 A0A1F5LLS8 A0A1F5LLS8 A0A1F5LMR9 A0A1F5LMR9 A0A1F5LNI8 A0A1F5LNI8 A0A1F5LTQ0 A0A1F5LTQ0 LSM8 LSM8 A0A1F5LUA5 A0A1F5LUA5 A0A1F5LXA6 A0A1F5LXA6 LSM3 LSM3 A0A1F5LYA1 A0A1F5LYA1 A0A1F5LZE6 A0A1F5LZE6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1F5L701Sm domain-containing protein. (79 aa)
A0A1F5LA94WD_REPEATS_REGION domain-containing protein. (359 aa)
A0A1F5LAA1Uncharacterized protein. (260 aa)
A0A1F5LDA4Uncharacterized protein. (383 aa)
A0A1F5LDX1Uncharacterized protein. (667 aa)
A0A1F5LFZ6Uncharacterized protein. (937 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (117 aa)
A0A1F5LJG9Small nuclear ribonucleoprotein Sm D2. (117 aa)
A0A1F5LLS8Uncharacterized protein. (2203 aa)
A0A1F5LMR9WD_REPEATS_REGION domain-containing protein. (518 aa)
A0A1F5LNI8Uncharacterized protein. (579 aa)
A0A1F5LTQ0Nop domain-containing protein. (513 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A0A1F5LUA5Tr-type G domain-containing protein. (983 aa)
A0A1F5LXA6Uncharacterized protein; Belongs to the DEAD box helicase family. (800 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
A0A1F5LYA1Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
A0A1F5LZE6JAB_MPN domain-containing protein. (2354 aa)
Your Current Organism:
Penicillium arizonense
NCBI taxonomy Id: 1835702
Other names: CBS 141311, Herb. C-F-101845, IBT 12289, P. arizonense, Penicillium arizonense Frisvad, Grijseels and J.C. Nielsen, 2016, Penicillium sp. JCN-2016
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