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A0A1F5L6H1 A0A1F5L6H1 A0A1F5L701 A0A1F5L701 A0A1F5L711 A0A1F5L711 A0A1F5L892 A0A1F5L892 A0A1F5LCF7 A0A1F5LCF7 A0A1F5LEG9 A0A1F5LEG9 A0A1F5LGX9 A0A1F5LGX9 LSM5 LSM5 A0A1F5LJG9 A0A1F5LJG9 A0A1F5LLH0 A0A1F5LLH0 LSM1 LSM1 A0A1F5LNY3 A0A1F5LNY3 A0A1F5LSI7 A0A1F5LSI7 LSM8 LSM8 LSM3 LSM3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1F5L6H1Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (122 aa)
A0A1F5L701Sm domain-containing protein. (79 aa)
A0A1F5L711Sm domain-containing protein. (212 aa)
A0A1F5L892Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (87 aa)
A0A1F5LCF7Sm domain-containing protein. (625 aa)
A0A1F5LEG9Small nuclear ribonucleoprotein Sm D3. (116 aa)
A0A1F5LGX9Sm domain-containing protein. (242 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (117 aa)
A0A1F5LJG9Small nuclear ribonucleoprotein Sm D2. (117 aa)
A0A1F5LLH0Small nuclear ribonucleoprotein G. (78 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (179 aa)
A0A1F5LNY3Sm domain-containing protein. (123 aa)
A0A1F5LSI7Uncharacterized protein. (538 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
Your Current Organism:
Penicillium arizonense
NCBI taxonomy Id: 1835702
Other names: CBS 141311, Herb. C-F-101845, IBT 12289, P. arizonense, Penicillium arizonense Frisvad, Grijseels and J.C. Nielsen, 2016, Penicillium sp. JCN-2016
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