(19 nodes) Annulate lamellae, and Postmitotic nuclear pore complex (NPC) reformation network (Seriola lalandi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ran	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (215 aa)
	snupn	Snurportin 1. (372 aa)
	LOC111644848	RanBD1 domain-containing protein. (129 aa)
	ENSSLDP00000004150	Uncharacterized protein. (78 aa)
	LOC111673333	Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family. (1758 aa)
	LOC111646130	Ran GTPase activating protein 1b. (544 aa)
	LOC111657633	Adhesion G protein-coupled receptor B1b; Belongs to the G-protein coupled receptor 2 family. (1100 aa)
	ENSSLDP00000017342	Uncharacterized protein. (283 aa)
	adgrd1	Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. (808 aa)
	ranbp1	RAN binding protein 1. (220 aa)
	rcc1	Regulator of chromosome condensation 1. (418 aa)
	tnpo3	Transportin 3. (923 aa)
	ENSSLDP00000022281	Exportin 1 (CRM1 homolog, yeast) a. (310 aa)
	ENSSLDP00000022307	Exportin 1 (CRM1 homolog, yeast) a. (580 aa)
	rangap1	RAN GTPase activating protein 1a. (560 aa)
	xpot	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (971 aa)
	LOC111669467	Exportin 1 (CRM1 homolog, yeast) b. (1071 aa)
	xpo5	Exportin 5. (1150 aa)
	kpnb1	Karyopherin (importin) beta 1. (884 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSLDP00000004150	ENSSLDP00000017342	ENSSLDP00000004150	ENSSLDP00000017342	Uncharacterized protein.	Uncharacterized protein.	0.567
ENSSLDP00000004150	LOC111644848	ENSSLDP00000004150	ENSSLDP00000002245	Uncharacterized protein.	RanBD1 domain-containing protein.	0.715
ENSSLDP00000004150	LOC111646130	ENSSLDP00000004150	ENSSLDP00000012266	Uncharacterized protein.	Ran GTPase activating protein 1b.	0.606
ENSSLDP00000004150	LOC111657633	ENSSLDP00000004150	ENSSLDP00000017316	Uncharacterized protein.	Adhesion G protein-coupled receptor B1b; Belongs to the G-protein coupled receptor 2 family.	0.567
ENSSLDP00000004150	LOC111673333	ENSSLDP00000004150	ENSSLDP00000008436	Uncharacterized protein.	Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family.	0.567
ENSSLDP00000004150	adgrd1	ENSSLDP00000004150	ENSSLDP00000017828	Uncharacterized protein.	Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.	0.815
ENSSLDP00000004150	kpnb1	ENSSLDP00000004150	ENSSLDP00000027819	Uncharacterized protein.	Karyopherin (importin) beta 1.	0.441
ENSSLDP00000004150	ran	ENSSLDP00000004150	ENSSLDP00000001645	Uncharacterized protein.	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.815
ENSSLDP00000004150	ranbp1	ENSSLDP00000004150	ENSSLDP00000020301	Uncharacterized protein.	RAN binding protein 1.	0.715
ENSSLDP00000004150	rangap1	ENSSLDP00000004150	ENSSLDP00000024023	Uncharacterized protein.	RAN GTPase activating protein 1a.	0.606
ENSSLDP00000004150	rcc1	ENSSLDP00000004150	ENSSLDP00000020794	Uncharacterized protein.	Regulator of chromosome condensation 1.	0.498
ENSSLDP00000004150	snupn	ENSSLDP00000004150	ENSSLDP00000001741	Uncharacterized protein.	Snurportin 1.	0.846
ENSSLDP00000004150	tnpo3	ENSSLDP00000004150	ENSSLDP00000021715	Uncharacterized protein.	Transportin 3.	0.438
ENSSLDP00000004150	xpo5	ENSSLDP00000004150	ENSSLDP00000026252	Uncharacterized protein.	Exportin 5.	0.408
ENSSLDP00000004150	xpot	ENSSLDP00000004150	ENSSLDP00000025072	Uncharacterized protein.	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	0.469
ENSSLDP00000017342	ENSSLDP00000004150	ENSSLDP00000017342	ENSSLDP00000004150	Uncharacterized protein.	Uncharacterized protein.	0.567
ENSSLDP00000017342	ENSSLDP00000022281	ENSSLDP00000017342	ENSSLDP00000022281	Uncharacterized protein.	Exportin 1 (CRM1 homolog, yeast) a.	0.567
ENSSLDP00000017342	ENSSLDP00000022307	ENSSLDP00000017342	ENSSLDP00000022307	Uncharacterized protein.	Exportin 1 (CRM1 homolog, yeast) a.	0.567
ENSSLDP00000017342	LOC111644848	ENSSLDP00000017342	ENSSLDP00000002245	Uncharacterized protein.	RanBD1 domain-containing protein.	0.713
ENSSLDP00000017342	LOC111646130	ENSSLDP00000017342	ENSSLDP00000012266	Uncharacterized protein.	Ran GTPase activating protein 1b.	0.818