STRINGSTRING
LOC111663903 LOC111663903 tcf21 tcf21 LOC111660288 LOC111660288 gata4 gata4 gata5 gata5 LOC111672780 LOC111672780 LOC111664669 LOC111664669 LOC111655561 LOC111655561 HCN4 HCN4 shox shox zfpm2 zfpm2 phf13 phf13 tbx3 tbx3 LOC111664737 LOC111664737 ENSSLDP00000016021 ENSSLDP00000016021 LOC111656202 LOC111656202 tbx15 tbx15 tbx20 tbx20 ENSSLDP00000020610 ENSSLDP00000020610 gata6 gata6 LOC111649517 LOC111649517 mef2c mef2c hand2 hand2 lmcd1 lmcd1 shox2 shox2 pitx2 pitx2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC111663903Homeobox domain-containing protein. (265 aa)
tcf21Transcription factor 21. (174 aa)
LOC111660288Uncharacterized protein. (529 aa)
gata4GATA binding protein 4. (386 aa)
gata5GATA binding protein 5. (384 aa)
LOC111672780T-box transcription factor 18. (513 aa)
LOC111664669NK2 homeobox 5. (327 aa)
LOC111655561WT1 transcription factor a. (431 aa)
HCN4Hyperpolarization activated cyclic nucleotide gated potassium channel 4. (1193 aa)
shoxShort stature homeobox. (301 aa)
zfpm2Zinc finger protein, FOG family member 2a. (1178 aa)
phf13PHD finger protein 13. (326 aa)
tbx3T-box transcription factor 3a. (715 aa)
LOC111664737T-box transcription factor 5a. (525 aa)
ENSSLDP00000016021Uncharacterized protein. (214 aa)
LOC111656202Homeobox domain-containing protein. (357 aa)
tbx15T-box transcription factor 15. (610 aa)
tbx20T-box transcription factor 20. (440 aa)
ENSSLDP00000020610Mesoderm posterior ba. (237 aa)
gata6GATA binding protein 6. (498 aa)
LOC111649517Hyperpolarization activated cyclic nucleotide-gated potassium channel 4. (1137 aa)
mef2cMyocyte enhancer factor 2cb. (475 aa)
hand2Heart and neural crest derivatives expressed 2. (251 aa)
lmcd1LIM and cysteine-rich domains 1. (370 aa)
shox2Short stature homeobox 2. (290 aa)
pitx2Homeobox protein. (313 aa)
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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