13 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111655422	Transporter associated with antigen processing, subunit type t, teleost specific. (713 aa)
	ENSSLDP00000000831	Ig-like domain-containing protein. (138 aa)
	LOC111659072	Protein disulfide-isomerase. (495 aa)
	pdia3	Protein disulfide-isomerase. (497 aa)
	LOC111651878	Calreticulin. (425 aa)
	LOC111669159	Calreticulin. (421 aa)
	tap1	Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP). (741 aa)
	LOC111661197	Transporter associated with antigen processing, subunit type a. (718 aa)
	LOC111671697	Calreticulin. (412 aa)
	LOC111657558	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. (118 aa)
	LOC111657547	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. (116 aa)
	LOC111645623	TAP binding protein (tapasin), tandem duplicate 2. (430 aa)
	LOC111645642	Ig-like domain-containing protein; Belongs to the MHC class I family. (362 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSLDP00000000831	LOC111651878	ENSSLDP00000000831	ENSSLDP00000005675	Ig-like domain-containing protein.	Calreticulin.	0.712
ENSSLDP00000000831	LOC111657547	ENSSLDP00000000831	ENSSLDP00000016353	Ig-like domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.822
ENSSLDP00000000831	LOC111657558	ENSSLDP00000000831	ENSSLDP00000016332	Ig-like domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.828
ENSSLDP00000000831	LOC111659072	ENSSLDP00000000831	ENSSLDP00000000844	Ig-like domain-containing protein.	Protein disulfide-isomerase.	0.685
ENSSLDP00000000831	LOC111669159	ENSSLDP00000000831	ENSSLDP00000012590	Ig-like domain-containing protein.	Calreticulin.	0.707
ENSSLDP00000000831	LOC111671697	ENSSLDP00000000831	ENSSLDP00000015730	Ig-like domain-containing protein.	Calreticulin.	0.707
ENSSLDP00000000831	pdia3	ENSSLDP00000000831	ENSSLDP00000003672	Ig-like domain-containing protein.	Protein disulfide-isomerase.	0.685
LOC111645623	LOC111645642	ENSSLDP00000024849	ENSSLDP00000030272	TAP binding protein (tapasin), tandem duplicate 2.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.672
LOC111645623	LOC111651878	ENSSLDP00000024849	ENSSLDP00000005675	TAP binding protein (tapasin), tandem duplicate 2.	Calreticulin.	0.954
LOC111645623	LOC111655422	ENSSLDP00000024849	ENSSLDP00000000759	TAP binding protein (tapasin), tandem duplicate 2.	Transporter associated with antigen processing, subunit type t, teleost specific.	0.955
LOC111645623	LOC111657547	ENSSLDP00000024849	ENSSLDP00000016353	TAP binding protein (tapasin), tandem duplicate 2.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.791
LOC111645623	LOC111657558	ENSSLDP00000024849	ENSSLDP00000016332	TAP binding protein (tapasin), tandem duplicate 2.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.830
LOC111645623	LOC111659072	ENSSLDP00000024849	ENSSLDP00000000844	TAP binding protein (tapasin), tandem duplicate 2.	Protein disulfide-isomerase.	0.888
LOC111645623	LOC111661197	ENSSLDP00000024849	ENSSLDP00000015603	TAP binding protein (tapasin), tandem duplicate 2.	Transporter associated with antigen processing, subunit type a.	0.960
LOC111645623	LOC111669159	ENSSLDP00000024849	ENSSLDP00000012590	TAP binding protein (tapasin), tandem duplicate 2.	Calreticulin.	0.954
LOC111645623	LOC111671697	ENSSLDP00000024849	ENSSLDP00000015730	TAP binding protein (tapasin), tandem duplicate 2.	Calreticulin.	0.954
LOC111645623	pdia3	ENSSLDP00000024849	ENSSLDP00000003672	TAP binding protein (tapasin), tandem duplicate 2.	Protein disulfide-isomerase.	0.959
LOC111645623	tap1	ENSSLDP00000024849	ENSSLDP00000013849	TAP binding protein (tapasin), tandem duplicate 2.	Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP).	0.947
LOC111645642	LOC111645623	ENSSLDP00000030272	ENSSLDP00000024849	Ig-like domain-containing protein; Belongs to the MHC class I family.	TAP binding protein (tapasin), tandem duplicate 2.	0.672
LOC111645642	LOC111651878	ENSSLDP00000030272	ENSSLDP00000005675	Ig-like domain-containing protein; Belongs to the MHC class I family.	Calreticulin.	0.803