(17 nodes) Mixed, incl. Nonaspanin (TM9SF), and emp24/gp25L/p24 family/GOLD network (Seriola lalandi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Tmed6	GOLD domain-containing protein. (77 aa)
	plpp6	Phospholipid phosphatase 6. (286 aa)
	LOC111653706	Transmembrane p24 trafficking protein 1a. (234 aa)
	Cabcoco1	Uncharacterized protein. (153 aa)
	LOC111673834	G protein-coupled receptor 182; Belongs to the G-protein coupled receptor 1 family. (366 aa)
	tm9sf4	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (644 aa)
	LOC111666506	acidPPc domain-containing protein. (243 aa)
	ENSSLDP00000011699	annotation not available (69 aa)
	PLPP7-2	Phospholipid phosphatase 7 (inactive). (297 aa)
	cabcoco1	Uncharacterized protein. (196 aa)
	LOC111672977	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (644 aa)
	LOC111668244	Transmembrane p24 trafficking protein 5. (228 aa)
	eef1aknmt	Methyltransferase like 13. (688 aa)
	LOC111666374	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (670 aa)
	fam234b	Family with sequence similarity 234 member B. (633 aa)
	LOC111645844	Zgc:77748. (285 aa)
	LOC111645816	Zgc:77748. (273 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cabcoco1	LOC111666374	ENSSLDP00000003776	ENSSLDP00000027658	Uncharacterized protein.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.493
Cabcoco1	LOC111672977	ENSSLDP00000003776	ENSSLDP00000021133	Uncharacterized protein.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.493
Cabcoco1	tm9sf4	ENSSLDP00000003776	ENSSLDP00000003979	Uncharacterized protein.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.428
LOC111653706	eef1aknmt	ENSSLDP00000003690	ENSSLDP00000023655	Transmembrane p24 trafficking protein 1a.	Methyltransferase like 13.	0.414
LOC111653706	tm9sf4	ENSSLDP00000003690	ENSSLDP00000003979	Transmembrane p24 trafficking protein 1a.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.412
LOC111666374	Cabcoco1	ENSSLDP00000027658	ENSSLDP00000003776	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Uncharacterized protein.	0.493
LOC111666374	cabcoco1	ENSSLDP00000027658	ENSSLDP00000018739	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Uncharacterized protein.	0.493
LOC111666374	eef1aknmt	ENSSLDP00000027658	ENSSLDP00000023655	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Methyltransferase like 13.	0.410
LOC111666374	fam234b	ENSSLDP00000027658	ENSSLDP00000032260	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Family with sequence similarity 234 member B.	0.497
LOC111666506	LOC111673834	ENSSLDP00000008636	ENSSLDP00000003962	acidPPc domain-containing protein.	G protein-coupled receptor 182; Belongs to the G-protein coupled receptor 1 family.	0.482
LOC111666506	eef1aknmt	ENSSLDP00000008636	ENSSLDP00000023655	acidPPc domain-containing protein.	Methyltransferase like 13.	0.493
LOC111668244	eef1aknmt	ENSSLDP00000023471	ENSSLDP00000023655	Transmembrane p24 trafficking protein 5.	Methyltransferase like 13.	0.429
LOC111668244	tm9sf4	ENSSLDP00000023471	ENSSLDP00000003979	Transmembrane p24 trafficking protein 5.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.412
LOC111672977	Cabcoco1	ENSSLDP00000021133	ENSSLDP00000003776	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Uncharacterized protein.	0.493
LOC111672977	cabcoco1	ENSSLDP00000021133	ENSSLDP00000018739	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Uncharacterized protein.	0.493
LOC111672977	eef1aknmt	ENSSLDP00000021133	ENSSLDP00000023655	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Methyltransferase like 13.	0.410
LOC111672977	fam234b	ENSSLDP00000021133	ENSSLDP00000032260	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Family with sequence similarity 234 member B.	0.497
LOC111673834	LOC111666506	ENSSLDP00000003962	ENSSLDP00000008636	G protein-coupled receptor 182; Belongs to the G-protein coupled receptor 1 family.	acidPPc domain-containing protein.	0.482
LOC111673834	plpp6	ENSSLDP00000003962	ENSSLDP00000000398	G protein-coupled receptor 182; Belongs to the G-protein coupled receptor 1 family.	Phospholipid phosphatase 6.	0.482
cabcoco1	LOC111666374	ENSSLDP00000018739	ENSSLDP00000027658	Uncharacterized protein.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.493