71 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111667029	Cholesterol 25-hydroxylase like 1, tandem duplicate 2; Belongs to the sterol desaturase family. (276 aa)
	LOC111667050	Cholesterol 25-hydroxylase like 1, tandem duplicate 1; Belongs to the sterol desaturase family. (277 aa)
	dhdds	Alkyl transferase; Belongs to the UPP synthase family. (335 aa)
	LOC111665910	F-box protein 30a. (738 aa)
	LOC111657863	Prostaglandin I2 (prostacyclin) synthase; Belongs to the cytochrome P450 family. (423 aa)
	fdft1	Farnesyl-diphosphate farnesyltransferase 1. (451 aa)
	LOC111669017	Zgc:194242. (210 aa)
	ENSSLDP00000002824	NUS1 dehydrodolichyl diphosphate synthase subunit. (191 aa)
	sc5d	Sterol-C5-desaturase; Belongs to the sterol desaturase family. (302 aa)
	LOC111672518	Cytochrome P450, family 46, subfamily A, polypeptide 1, tandem duplicate 4. (507 aa)
	ebp	EBP cholestenol delta-isomerase. (232 aa)
	soat1	O-acyltransferase. (498 aa)
	msmo1	Methylsterol monooxygenase 1; Belongs to the sterol desaturase family. (291 aa)
	LOC111657337	Uncharacterized protein. (112 aa)
	LOC111659793	O-acyltransferase. (531 aa)
	LOC111653771	Hydroxysteroid (17-beta) dehydrogenase 7. (336 aa)
	LOC111670231	Cytochrome P450, family 7, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (499 aa)
	dhcr24	24-dehydrocholesterol reductase. (516 aa)
	pmvk	Phosphomevalonate kinase. (199 aa)
	idi1	Isopentenyl-diphosphate delta isomerase 1. (288 aa)
	LOC111653799	Si:dkey-91i10.3; Belongs to the cytochrome P450 family. (546 aa)
	LOC111655581	F-box protein 30b. (760 aa)
	nsdhl	NAD(P) dependent steroid dehydrogenase-like; Belongs to the 3-beta-HSD family. (380 aa)
	LOC111649189	Uncharacterized methyltransferase YdaC-like. (167 aa)
	sqle	Squalene epoxidase a. (572 aa)
	LOC111670549	Phosphomevalonate kinase. (139 aa)
	as3mt	Arsenite methyltransferase. (378 aa)
	hmgcr	3-hydroxy-3-methylglutaryl coenzyme A reductase. (844 aa)
	ubiad1	UbiA prenyltransferase domain containing 1. (349 aa)
	LOC111667915	NUS1 dehydrodolichyl diphosphate synthase subunit. (244 aa)
	LOC111648405	Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family. (513 aa)
	ENSSLDP00000014758	Uncharacterized protein. (522 aa)
	ENSSLDP00000014921	Uncharacterized protein. (842 aa)
	dhcr7	7-dehydrocholesterol reductase. (478 aa)
	LOC111666845	3-hydroxy-3-methylglutaryl coenzyme A reductase. (883 aa)
	ENSSLDP00000017884	Cholesterol 25-hydroxylase like 2; Belongs to the sterol desaturase family. (285 aa)
	sigmar1	Sigma non-opioid intracellular receptor 1. (222 aa)
	LOC111666108	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (285 aa)
	LOC111647921	Cholesterol 25-hydroxylase like 3; Belongs to the sterol desaturase family. (264 aa)
	LOC111655797	Phosphoethanolamine methyltransferase. (588 aa)
	lss	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (735 aa)
	rusc1	Uncharacterized protein. (1622 aa)
	fdps	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (358 aa)
	LOC111657606	Cytochrome P450, family 51; Belongs to the cytochrome P450 family. (666 aa)
	faxdc2	Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family. (338 aa)
	THUMPD2	THUMP domain containing 2. (601 aa)
	ENSSLDP00000021536	RUN domain-containing protein. (91 aa)
	sdr42e1	Short chain dehydrogenase/reductase family 42E, member 1; Belongs to the 3-beta-HSD family. (386 aa)
	hsd3b7	Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase; Belongs to the 3-beta-HSD family. (366 aa)
	tm7sf2	Transmembrane 7 superfamily member 2. (425 aa)
	lbr	Lamin B receptor. (622 aa)
	FBXO40	F-box protein 40. (660 aa)
	mvd	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (402 aa)
	pyroxd2	Pyridine nucleotide-disulphide oxidoreductase domain 2. (582 aa)
	LOC111667407	Cytochrome P450, family 27, subfamily A, polypeptide 7; Belongs to the cytochrome P450 family. (514 aa)
	LOC111672420	Si:ch211-113j14.1; Belongs to the cytochrome P450 family. (554 aa)
	HSD17B7	Hydroxysteroid 17-beta dehydrogenase 7. (340 aa)
	pdss1	Prenyl (decaprenyl) diphosphate synthase, subunit 1; Belongs to the FPP/GGPP synthase family. (421 aa)
	ERG28	Ergosterol biosynthesis 28 homolog. (143 aa)
	LOC111653411	Zgc:153372. (334 aa)
	Wdr97	WD_REPEATS_REGION domain-containing protein. (580 aa)
	ch25h	Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family. (258 aa)
	LOC111665733	Procollagen C-endopeptidase enhancer b. (566 aa)
	LOC111659632	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (515 aa)
	coq2	4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate. (391 aa)
	pdss2	Prenyl (decaprenyl) diphosphate synthase, subunit 2; Belongs to the FPP/GGPP synthase family. (384 aa)
	ggps1	Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. (315 aa)
	rusc2	RUN and SH3 domain containing 2. (1428 aa)
	mvk	Mevalonate kinase. (366 aa)
	r3hdm4	R3H domain containing 4. (256 aa)
	ENSSLDP00000033199	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (264 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSLDP00000002824	ENSSLDP00000021536	ENSSLDP00000002824	ENSSLDP00000021536	NUS1 dehydrodolichyl diphosphate synthase subunit.	RUN domain-containing protein.	0.527
ENSSLDP00000002824	FBXO40	ENSSLDP00000002824	ENSSLDP00000024490	NUS1 dehydrodolichyl diphosphate synthase subunit.	F-box protein 40.	0.527
ENSSLDP00000002824	LOC111655581	ENSSLDP00000002824	ENSSLDP00000010708	NUS1 dehydrodolichyl diphosphate synthase subunit.	F-box protein 30b.	0.527
ENSSLDP00000002824	LOC111659632	ENSSLDP00000002824	ENSSLDP00000029724	NUS1 dehydrodolichyl diphosphate synthase subunit.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.499
ENSSLDP00000002824	LOC111665910	ENSSLDP00000002824	ENSSLDP00000001634	NUS1 dehydrodolichyl diphosphate synthase subunit.	F-box protein 30a.	0.527
ENSSLDP00000002824	LOC111666845	ENSSLDP00000002824	ENSSLDP00000017646	NUS1 dehydrodolichyl diphosphate synthase subunit.	3-hydroxy-3-methylglutaryl coenzyme A reductase.	0.423
ENSSLDP00000002824	LOC111667915	ENSSLDP00000002824	ENSSLDP00000013814	NUS1 dehydrodolichyl diphosphate synthase subunit.	NUS1 dehydrodolichyl diphosphate synthase subunit.	0.409
ENSSLDP00000002824	THUMPD2	ENSSLDP00000002824	ENSSLDP00000021487	NUS1 dehydrodolichyl diphosphate synthase subunit.	THUMP domain containing 2.	0.647
ENSSLDP00000002824	coq2	ENSSLDP00000002824	ENSSLDP00000030697	NUS1 dehydrodolichyl diphosphate synthase subunit.	4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.	0.842
ENSSLDP00000002824	dhdds	ENSSLDP00000002824	ENSSLDP00000000356	NUS1 dehydrodolichyl diphosphate synthase subunit.	Alkyl transferase; Belongs to the UPP synthase family.	0.965
ENSSLDP00000002824	fdps	ENSSLDP00000002824	ENSSLDP00000020140	NUS1 dehydrodolichyl diphosphate synthase subunit.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.527
ENSSLDP00000002824	ggps1	ENSSLDP00000002824	ENSSLDP00000032330	NUS1 dehydrodolichyl diphosphate synthase subunit.	Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.	0.527
ENSSLDP00000002824	hmgcr	ENSSLDP00000002824	ENSSLDP00000013227	NUS1 dehydrodolichyl diphosphate synthase subunit.	3-hydroxy-3-methylglutaryl coenzyme A reductase.	0.423
ENSSLDP00000002824	idi1	ENSSLDP00000002824	ENSSLDP00000010117	NUS1 dehydrodolichyl diphosphate synthase subunit.	Isopentenyl-diphosphate delta isomerase 1.	0.848
ENSSLDP00000002824	mvd	ENSSLDP00000002824	ENSSLDP00000024753	NUS1 dehydrodolichyl diphosphate synthase subunit.	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.	0.510
ENSSLDP00000002824	mvk	ENSSLDP00000002824	ENSSLDP00000033015	NUS1 dehydrodolichyl diphosphate synthase subunit.	Mevalonate kinase.	0.515
ENSSLDP00000002824	pdss1	ENSSLDP00000002824	ENSSLDP00000027018	NUS1 dehydrodolichyl diphosphate synthase subunit.	Prenyl (decaprenyl) diphosphate synthase, subunit 1; Belongs to the FPP/GGPP synthase family.	0.527
ENSSLDP00000002824	pdss2	ENSSLDP00000002824	ENSSLDP00000031291	NUS1 dehydrodolichyl diphosphate synthase subunit.	Prenyl (decaprenyl) diphosphate synthase, subunit 2; Belongs to the FPP/GGPP synthase family.	0.527
ENSSLDP00000002824	rusc1	ENSSLDP00000002824	ENSSLDP00000020081	NUS1 dehydrodolichyl diphosphate synthase subunit.	Uncharacterized protein.	0.527
ENSSLDP00000002824	rusc2	ENSSLDP00000002824	ENSSLDP00000032813	NUS1 dehydrodolichyl diphosphate synthase subunit.	RUN and SH3 domain containing 2.	0.527